Gene omics information

Query gene ID PtpAffx.795.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7594.1PtpAffx.795.1.A1_atCV273354hypothetical protein-5e+0At5g59480haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.5380.5PtpAffx.213719.1.S1_atpmrna26773hypothetical protein-2e-48At3g51630WNK5 (WITH NO LYSINE (K) KINASE 5)S.X.H.G.
0.5078.6Ptp.7695.1.S1_s_atBU862504hypothetical protein-2e-2At5g02020unknown proteinS.X.H.G.
0.5078.6PtpAffx.214531.1.S1_atpmrna28244hypothetical protein-1e-7At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.4471.9PtpAffx.77546.1.S1_s_atBI127036hypothetical protein-3e-1At5g12310zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4067.0PtpAffx.204632.1.S1_atpmrna9105hypothetical protein-1e-1At5g50200WR3 (WOUND-RESPONSIVE 3)S.X.H.G.
0.3964.6Ptp.6340.1.S1_atBU888207hypothetical protein-2e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2543.6Ptp.3720.1.S1_atCX657369hypothetical protein-1e-1At1g55450embryo-abundant protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.299.4GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
10.899.1GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
6.597.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-138PtpAffx.214452.1.S1_atpmrna28100hypothetical protein-7e-27At2g24130leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.011e-138PtpAffx.206533.1.S1_atpmrna12964hypothetical protein-2e-49At2g24130leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.024e-136PtpAffx.70149.1.A1_s_atCV262231hypothetical protein-4e-6At5g26850-C.G.S.X.
0.014e-136PtpAffx.210853.1.S1_atpmrna21314hypothetical protein-8e-12At5g26850-C.G.S.X.
0.012e+034PtpAffx.213730.1.S1_atpmrna26796hypothetical protein-1e-22At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.012e+034PtpAffx.210463.1.S1_s_atpmrna20541hypothetical protein-7e-12At1g74160unknown proteinC.G.S.X.
0.012e+034PtpAffx.204681.1.S1_atpmrna9216hypothetical protein-4e-106At4g34100protein binding / zinc ion bindingC.G.S.X.
0.012e+034PtpAffx.203339.1.S1_atpmrna6644hypothetical protein-4e-1At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeC.G.S.X.
0.022e+034PtpAffx.15919.1.S1_s_atCV225697hypothetical protein-1e-20At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e+032Arabidopsis thalianaAt5g59480836067haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA---C.G.S.X.
0.233e-240Glycine maxGmaAffx.46769.1.S1_atBQ298800--1e+0At3g46460UBC13 (ubiquitin-conjugating enzyme 13)C.G.S.X.
0.049e+030Hordeum vulgareHVSMEb0013O20r2_atHVSMEb0013O20r2--1e+0At3g25270nucleic acid bindingC.G.S.X.
0.049e+032Oryza sativaOs01g0974600CA757906-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein1e+0At1g76460RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.031e+034Triticum aestivumTaAffx.26303.1.S1_atCA690187--4e+0At3g58230unknown proteinC.G.S.X.
0.054e-134Vitis vinifera1620573_atCB836894--1e+0At1g15790unknown proteinC.G.S.X.
0.022e+032Zea maysZm.18546.1.A1_atCO529631hypothetical protein LOC100276680-9e-2At3g12660FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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