Gene omics information

Query gene ID PtpAffx.77318.2.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4369.7PtpAffx.77318.2.S1_atCX658035hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)S.X.H.G.
0.4875.4Ptp.4515.1.S1_s_atCV253179hypothetical protein-5e-79At5g47770FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1)S.X.H.G.
0.4673.7PtpAffx.211137.1.S1_atpmrna21879hypothetical protein-5e-8At3g03540NPC5 (NON-SPECIFIC PHOSPHOLIPASE C5)S.X.H.G.
0.4471.9PtpAffx.22865.1.S1_atDN484594hypothetical protein-3e-5At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinS.X.H.G.
0.4067.0Ptp.4933.1.S1_atDN490851hypothetical protein-9e-19At3g11920glutaredoxin-relatedS.X.H.G.
0.2950.5PtpAffx.5423.1.S1_s_atCV229504hypothetical protein-3e-24At4g11820MVA1S.X.H.G.
0.2645.2PtpAffx.11966.1.A1_atCV245062hypothetical protein-1e-1At3g15760unknown proteinS.X.H.G.
0.1525.3Ptp.605.1.A1_atCK089297--2e+0At5g54150unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.099.1GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
9.298.8GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
7.098.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
6.797.9GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.495.9GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.650847PtpAffx.77318.1.S1_x_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeC.G.S.X.
0.650847PtpAffx.77318.1.S1_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeC.G.S.X.
0.321e-137490Ptp.4052.2.A1_atCV258257--4e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.134e-36153PtpAffx.77318.3.S1_atDN494497hypothetical protein-3e-3At2g43600glycoside hydrolase family 19 proteinC.G.S.X.
0.272e-22107PtpAffx.4.1.A1_a_atU01660.1hypothetical protein-4e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.154e-1479PtpAffx.4.3.A1_x_atCV277108--6e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.132e-757PtpAffx.2522.3.A1_atCV269821hypothetical protein-6e-1At3g18160peroxin-3 family proteinC.G.S.X.
0.093e-654PtpAffx.2522.1.A1_a_atM25337.1hypothetical protein-9e+0At5g6307040S ribosomal protein S15, putativeC.G.S.X.
0.154e-550Ptp.3754.1.A1_atDN497958--7e-3At1g02360chitinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.175e-446Arabidopsis thalianaAt3g12500820429ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.---C.G.S.X.
0.106e-446Glycine maxGma.2833.1.S1_s_atAF202731.1chitinase class I-9e-3At4g01700chitinase, putativeC.G.S.X.
0.113e-342Hordeum vulgareContig3578_atContig3578--6e+0At1g15757-C.G.S.X.
0.083e-344Oryza sativaOs10g0542900BM038035-Chitinase (EC 3.2.1.14) (Fragment)3e-5At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.091e-138Triticum aestivumTaAffx.133698.1.A1_s_atBJ296326--1e+0At2g43570chitinase, putativeC.G.S.X.
0.444e-23107Vitis vinifera1620505_atZ54234.1chitinase class I-2e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.132e-446Zea maysZm.16805.3.S1_atBM381902basic endochitinase C-2e-10At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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