Gene omics information

Query gene ID PtpAffx.77318.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.77318.1.S1_x_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeS.X.H.G.
0.6791.1PtpAffx.4462.1.S1_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)S.X.H.G.
0.5078.6PtpAffx.4462.1.S1_a_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)S.X.H.G.
0.5078.6PtpAffx.7639.1.A1_atBP935195hypothetical protein-3e+0At3g25130unknown proteinS.X.H.G.
0.069.8PtpAffx.14710.1.A1_a_atCV269309hypothetical protein-2e+0At3g62907unknown proteinS.X.H.G.
0.058.3PtpAffx.24353.1.A1_a_atCV274454hypothetical protein-3e-1At1g26250proline-rich extensin, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.296.8GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.495.9GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.295.6GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.095.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9901998PtpAffx.77318.1.S1_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeC.G.S.X.
0.650847PtpAffx.77318.2.S1_atCX658035hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.265e-79295Ptp.4052.2.A1_atCV258257--4e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.384e-61236PtpAffx.77318.3.S1_atDN494497hypothetical protein-3e-3At2g43600glycoside hydrolase family 19 proteinC.G.S.X.
0.273e-1997PtpAffx.4.1.A1_a_atU01660.1hypothetical protein-4e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.152e-1687PtpAffx.4.3.A1_x_atCV277108--6e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.081e-861PtpAffx.224417.1.S1_atpmrna42923--3e-4At2g43620chitinase, putativeC.G.S.X.
0.103e-654PtpAffx.2522.3.A1_atCV269821hypothetical protein-6e-1At3g18160peroxin-3 family proteinC.G.S.X.
0.143e-654Ptp.3754.1.A1_atDN497958--7e-3At1g02360chitinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-240Arabidopsis thalianaAt2g43570818959chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV---C.G.S.X.
0.176e-1169Glycine maxGma.2833.1.S1_s_atAF202731.1chitinase class I-9e-3At4g01700chitinase, putativeC.G.S.X.
0.073e-1065Hordeum vulgareContig25195_atContig25195--5e+0At5g16170unknown proteinC.G.S.X.
0.031e+036Oryza sativaOs05g0138200AK110261.1-Chitinase (Class II) (EC 3.2.1.14)2e-3At3g54420ATEP3C.G.S.X.
0.072e-344Triticum aestivumTa.1929.1.S1_atCK212185--4e-5At2g43610glycoside hydrolase family 19 proteinC.G.S.X.
0.336e-26117Vitis vinifera1620505_atZ54234.1chitinase class I-2e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.041e+034Zea maysZm.201.1.S1_atL16798.1class I acidic chitinase-8e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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