Gene omics information

Query gene ID PtpAffx.75855.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.75855.1.A1_atCV255005hypothetical protein-2e-3At4g10540subtilase family proteinS.X.H.G.
0.4471.9PtpAffx.55786.1.S1_s_atCA825382hypothetical protein-5e-35At4g09510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeS.X.H.G.
0.3357.5PtpAffx.111048.1.S1_atBU883776hypothetical protein-2e-94At2g22480PFK5 (PHOSPHOFRUCTOKINASE 5)S.X.H.G.
0.2850.5Ptp.6779.1.S1_s_atCV258940hypothetical protein-5e-3At2g28430unknown proteinS.X.H.G.
0.2747.1PtpAffx.145980.1.S1_s_atCA823834hypothetical protein-3e-5At1g35580CINV1 (cytosolic invertase 1)S.X.H.G.
0.2136.5PtpAffx.207740.1.S1_atpmrna15383hypothetical protein-9e-92At3g11320organic anion transmembrane transporterS.X.H.G.
0.2034.6PtpAffx.5890.2.S1_atCF232083hypothetical protein-5e-3At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.098.9GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
6.097.5GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.996.5GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.494.0GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.193.2GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.892.1GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.554e-119428PtpAffx.116558.1.A1_atBU832864hypothetical protein-3e-1At4g23880unknown proteinC.G.S.X.
0.082e-654PtpAffx.201410.1.S1_atpmrna2781--1e-1At4g21630subtilase family proteinC.G.S.X.
0.076e-446PtpAffx.65038.1.A1_atCK096738hypothetical protein-3e-2At4g21640subtilase family proteinC.G.S.X.
0.036e-136PtpAffx.219985.1.S1_atpmrna36197hypothetical protein-3e-3At4g17430unknown proteinC.G.S.X.
0.026e-136Ptp.7993.1.S1_atDN503226hypothetical protein-9e-3At1g04110SDD1 (STOMATAL DENSITY AND DISTRIBUTION)C.G.S.X.
0.012e+034PtpAffx.225506.1.S1_atpmrna44897hypothetical protein-1e-6At5g03620subtilase family proteinC.G.S.X.
0.012e+034PtpAffx.223360.1.S1_atpmrna41316hypothetical protein-2e-5At3g03140-C.G.S.X.
0.022e+034PtpAffx.209214.1.S1_atpmrna18219hypothetical protein-1e-11At1g79250AGC1.7 (AGC KINASE 1.7)C.G.S.X.
0.022e+034PtpAffx.207819.1.S1_atpmrna15537hypothetical protein-4e-11At1g79250AGC1.7 (AGC KINASE 1.7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-344Arabidopsis thalianaAt4g10540826646subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM---C.G.S.X.
0.042e-138Glycine maxGma.1101.1.S1_s_atBI969248--5e-1At5g14750ATMYB66 (MYB DOMAIN PROTEIN 66)C.G.S.X.
0.031e+130Hordeum vulgareHB23F22r_atHB23F22r--3e+0At3g58010unknown proteinC.G.S.X.
0.032e-138Oryza sativaOsAffx.18866.1.S1_at---0C.G.S.X.
0.043e-240Triticum aestivumTaAffx.32049.1.S1_atCA602314--1e+0At1g32980subtilisin-like serine protease-relatedC.G.S.X.
0.022e+032Vitis vinifera1616080_atCF511120hypothetical protein LOC100254062-5e-13At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.033e+032Zea maysZm.17438.1.A1_atCK347582VP15-3e-1At3g28970AAR3 (antiauxin-resistant 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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