Gene omics information

Query gene ID PtpAffx.74227.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.74227.1.A1_atCV274267hypothetical protein-2e+0At2g04420nucleic acid bindingS.X.H.G.
0.4067.0PtpAffx.50821.1.A1_atCV231185--3e+0At4g17730SYP23 (SYNTAXIN OF PLANTS 23)S.X.H.G.
0.3661.6PtpAffx.6509.1.S1_atCN549620hypothetical protein-1e-2At2g12400unknown proteinS.X.H.G.
0.3357.5PtpAffx.210472.1.S1_atpmrna20557hypothetical protein-3e-22At3g02250unknown proteinS.X.H.G.
0.2747.1PtpAffx.39381.1.A1_atCV260270hypothetical protein-4e+0At4g30660hydrophobic protein, putative / low temperature and salt responsive protein, putativeS.X.H.G.
0.2543.6PtpAffx.101360.1.A1_atCV267798hypothetical protein-2e+0At3g53210nodulin MtN21 family proteinS.X.H.G.
0.1729.1PtpAffx.6053.1.S1_atCN520953--9e-21At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)S.X.H.G.
0.0914.6PtpAffx.76713.1.S1_s_atCV243996hypothetical protein-3e-8At2g14835zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.0711.6PtpAffx.10365.2.S1_atDN485109hypothetical protein-2e-9At2g33470GLTP1 (glycolipid transfer protein 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.4GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
6.397.7GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.296.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.996.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.596.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
3.894.9GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.193.2GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
2.691.3GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5401120Ptp.2102.1.S1_s_atCV270946hypothetical protein-3e-6At1g05850POM1 (POM-POM1)C.G.S.X.
0.333e-52206Ptp.375.1.A1_atCK088699hypothetical protein-4e+0At4g26820-C.G.S.X.
0.117e-1685PtpAffx.67884.1.A1_atBP933003--4e+0At3g45610Dof-type zinc finger domain-containing proteinC.G.S.X.
0.071e-1481Ptp.5529.1.S1_s_atCV252273hypothetical protein-6e-17At3g16920chitinaseC.G.S.X.
0.016e-136PtpAffx.224412.1.S1_atpmrna42911hypothetical protein-5e-27At5g03260LAC11 (laccase 11)C.G.S.X.
0.026e-136PtpAffx.214566.1.S1_atpmrna28296hypothetical protein-3e-14At4g32272-C.G.S.X.
0.032e+034PtpAffx.207077.1.S1_s_atpmrna14031hypothetical protein-1e-1At1g26770ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)C.G.S.X.
0.022e+034PtpAffx.14645.1.S1_atCK089610--1e+0At2g13660unknown proteinC.G.S.X.
0.022e+034PtpAffx.113703.1.S1_atDN493001hypothetical protein-3e-36At2g14170ALDH6B2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt2g04420814982nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:mitochondrion;PBO---C.G.S.X.
0.113e-963Glycine maxGma.10757.2.S1_s_atBG650239--2e-4At3g16920chitinaseC.G.S.X.
0.043e-652Hordeum vulgareContig7454_atContig7454--1e-8At1g05850POM1 (POM-POM1)C.G.S.X.
0.038e-136Oryza sativaOsAffx.27922.1.S1_at---0C.G.S.X.
0.032e+034Triticum aestivumTa.18592.1.S1_atCA639286--2e+0At1g26300BSD domain-containing proteinC.G.S.X.
0.213e-33141Vitis vinifera1621583_atCF404733hypothetical protein LOC100266937-3e-12At1g05850POM1 (POM-POM1)C.G.S.X.
0.037e-134Zea maysZm.6323.1.A1_atAI691399--3e+0At3g06610DNA-binding enhancer protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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