Gene omics information

Query gene ID PtpAffx.73922.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.73922.1.S1_s_atDN501167hypothetical protein-2e-11At2g30800HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM)S.X.H.G.
0.5582.2PtpAffx.223619.1.S1_atpmrna41689hypothetical protein-2e-136At3g26560ATP-dependent RNA helicase, putativeS.X.H.G.
0.5078.6PtpAffx.201126.1.S1_atpmrna2215--3e-30At5g64270splicing factor, putativeS.X.H.G.
0.4673.7PtpAffx.215528.1.S1_s_atpmrna29780hypothetical protein-3e-52At1g28420HB-1 (homeobox-1)S.X.H.G.
0.3357.5PtpAffx.88869.1.A1_atCV248897hypothetical protein-2e-86At5g53480importin beta-2, putativeS.X.H.G.
0.3052.0PtpAffx.101651.1.S1_atCV256378hypothetical protein-3e-37At1g34220unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.495.9GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.200815PtpAffx.205676.1.S1_atpmrna11208hypothetical protein-2e-34At2g30800HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM)C.G.S.X.
0.031e+034PtpAffx.76061.1.A1_atCV245469hypothetical protein-5e-1At5g19870unknown proteinC.G.S.X.
0.031e+034PtpAffx.29222.1.S1_atAY615966.1--2e-28At1g69120AP1 (APETALA1)C.G.S.X.
0.011e+034PtpAffx.219372.1.S1_atpmrna35276--3e-3At3g06530bindingC.G.S.X.
0.031e+034PtpAffx.217215.1.S1_atpmrna32390hypothetical protein-2e+0At5g44200CBP20 (CAP-BINDING PROTEIN 20)C.G.S.X.
0.021e+034PtpAffx.209995.1.S1_atpmrna19718hypothetical protein-9e-84At5g54310AGD5 (ARF-GAP domain 5)C.G.S.X.
0.045e+032PtpAffx.65137.1.S1_atDN493780--5e-3At3g15920phox (PX) domain-containing proteinC.G.S.X.
0.035e+032PtpAffx.52652.1.A1_atCA824023hypothetical protein-7e-3At1g69320CLE10 (CLAVATA3/ESR-RELATED 10)C.G.S.X.
0.025e+032PtpAffx.36616.1.S1_atCV228724hypothetical protein-4e-11At5g57850aminotransferase class IV family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-1169Arabidopsis thalianaAt2g30800817631HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM)Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.---C.G.S.X.
0.043e-136Glycine maxHgAffx.15723.3.S1_atCK349749--6e-2At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeC.G.S.X.
0.042e+032Hordeum vulgareContig22849_atContig22849--1e-2At3g63230unknown proteinC.G.S.X.
0.042e+034Oryza sativaOs07g04266009635.m02327--7e-1At2g40450speckle-type POZ protein-relatedC.G.S.X.
0.053e+032Triticum aestivumTaAffx.105082.1.S1_atCA739534--5e-1At5g57123unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1615302_atCF414670--7e-1At3g44716unknown proteinC.G.S.X.
0.054e-134Zea maysZmAffx.511.1.A1_atAI692026--8e-1At1g38630unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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