Gene omics information

Query gene ID PtpAffx.7228.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.7228.1.A1_atBP933598hypothetical protein-7e+0Atmg00990-S.X.H.G.
0.5380.5PtpAffx.148817.1.S1_atBI125776hypothetical protein-3e-2At4g15920-S.X.H.G.
0.4471.9PtpAffx.70120.1.A1_atCV271262ethylene-insensitive 3c /// ethylene-insensitive 3d-5e-1At3g52300ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)S.X.H.G.
0.4471.9Ptp.5162.1.S1_s_atCF936341hypothetical protein-7e-10At2g29290tropinone reductase, putative / tropine dehydrogenase, putativeS.X.H.G.
0.4471.9Ptp.5101.1.S1_s_atCV237236hypothetical protein-3e+0At4g38490unknown proteinS.X.H.G.
0.4067.0Ptp.6000.1.S1_atCV277868hypothetical protein-4e-1At4g15545unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.698.6GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
8.198.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
7.398.2GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.997.4GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.697.2GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.597.1GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.296.8GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.196.8GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.096.6GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.996.5GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-138PtpAffx.212715.1.S1_atpmrna24865hypothetical protein-2e+0At4g16008unknown proteinC.G.S.X.
0.026e-136PtpAffx.692.32.A1_atCV258973--5e+0At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)C.G.S.X.
0.026e-136PtpAffx.692.32.A1_a_atCV258973--5e+0At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)C.G.S.X.
0.023e+034PtpAffx.219858.1.S1_atpmrna36012hypothetical protein-2e+0At3g29033glycine-rich proteinC.G.S.X.
0.033e+034PtpAffx.206361.1.S1_atpmrna12628hypothetical protein-2e+1At5g45740unknown proteinC.G.S.X.
0.023e+034PtpAffx.202301.1.S1_atpmrna4603NAC domain protein, IPR003441-1e-29At2g46770EMB2301 (EMBRYO DEFECTIVE 2301)C.G.S.X.
0.013e+034Ptp.6806.1.S1_atCV274320--3e-24At1g73180eukaryotic translation initiation factor-relatedC.G.S.X.
0.021e+132PtpAffx.94975.1.A1_atCV264804--3e-1At3g04400emb2171 (embryo defective 2171)C.G.S.X.
0.021e+132PtpAffx.60041.1.A1_atDN488940--2e+1At5g66211unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Arabidopsis thalianaAtmg00990--NADH dehydrogenase subunit 3---C.G.S.X.
0.082e-757Glycine maxGma.1660.1.S1_atBE657327--1e-2At4g33930glycine-rich proteinC.G.S.X.
0.029e-134Hordeum vulgareContig1129_atContig1129--8e-8At3g09480histone H2B, putativeC.G.S.X.
0.034e+034Oryza sativaOs05g04605009633.m03580-Histone H2B.27e-1At3g45980HTB9C.G.S.X.
0.022e+034Triticum aestivumTa.7378.6.S1_atBJ255915--4e-13At1g07790HTB1C.G.S.X.
0.031e-136Vitis vinifera1621652_atCF518056hypothetical protein LOC100262206-6e-9At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.028e-134Zea maysZm.14497.13.A1_a_atCB924237hypothetical protein LOC100273745-4e-19At1g07790HTB1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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