Gene omics information

Query gene ID PtpAffx.71189.3.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.71189.3.S1_s_atCV276271hypothetical protein-2e-46At2g28310unknown proteinS.X.H.G.
0.6086.0PtpAffx.38601.1.A1_atCK318400hypothetical protein-3e-7At3g50500SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2)S.X.H.G.
0.5582.2PtpAffx.151904.1.A1_atBP934640hypothetical protein-1e+0At1g54150zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5582.2PtpAffx.205333.1.S1_atpmrna10561hypothetical protein-3e-107At3g50500SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2)S.X.H.G.
0.2441.8PtpAffx.151163.1.S1_atCX173673hypothetical protein-6e-15At2g28930APK1BS.X.H.G.
0.1729.1PtpAffx.64943.1.S1_s_atBI136037hypothetical protein-6e-8At4g09150T-complex protein 11S.X.H.G.
0.058.3PtpAffx.62918.1.A1_a_atCV239158--8e-15At5g27380GSH2 (GLUTATHIONE SYNTHETASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.897.4GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.395.8GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.894.9GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.494.0GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.193.2GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6201497PtpAffx.208668.1.S1_x_atpmrna17195hypothetical protein-6e-76At1g67850unknown proteinC.G.S.X.
0.680656PtpAffx.71189.1.A1_a_atCV277875hypothetical protein-1e-32At1g08040unknown proteinC.G.S.X.
0.261e-42174PtpAffx.149830.1.S1_atBU895366hypothetical protein-2e-70At1g08040unknown proteinC.G.S.X.
0.187e-38159PtpAffx.50066.1.S1_atCV260350hypothetical protein-1e-22At1g67850unknown proteinC.G.S.X.
0.241e-30135PtpAffx.71189.5.A1_atCV256485hypothetical protein-3e-1At3g27470unknown proteinC.G.S.X.
0.122e-1377PtpAffx.95597.1.A1_s_atCV240535hypothetical protein-2e-27At4g18530unknown proteinC.G.S.X.
0.075e-859PtpAffx.211968.1.S1_atpmrna23496--2e-16At4g12840unknown proteinC.G.S.X.
0.047e-446PtpAffx.209711.1.S1_atpmrna19165hypothetical protein-6e-28At1g61240unknown proteinC.G.S.X.
0.024e-240PtpAffx.213830.1.S1_atpmrna26987hypothetical protein-2e-10At1g80570F-box family protein (FBL14)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.392e-46186Arabidopsis thalianaAt2g28310817377unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO---C.G.S.X.
0.485e-113408Glycine maxGma.16609.2.S1_atBM085783--9e-63At1g67850unknown proteinC.G.S.X.
0.386e-42171Hordeum vulgareContig17553_atContig17553--2e-34At1g08040unknown proteinC.G.S.X.
0.342e-66254Oryza sativaOs01g0910400CA760301-Protein of unknown function DUF707 family protein3e-22At2g28310unknown proteinC.G.S.X.
0.355e-35149Triticum aestivumTa.6006.1.S1_atCK216649--9e-34At1g08040unknown proteinC.G.S.X.
0.323e-58224Vitis vinifera1618128_atCB009517hypothetical protein LOC100267242-2e-112At2g28310unknown proteinC.G.S.X.
0.366e-51200Zea maysZm.6729.2.A1_atAI395991lysine ketoglutarate reductase trans-splicing related 1-4e-23At2g28310unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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