Gene omics information

Query gene ID PtpAffx.71189.1.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6588.6PtpAffx.71189.1.A1_a_atCV277875hypothetical protein-1e-32At1g08040unknown proteinS.X.H.G.
0.2136.5PtpAffx.52716.2.A1_s_atCV260868hypothetical protein-2e-40At5g17380pyruvate decarboxylase family proteinS.X.H.G.
0.2034.6PtpAffx.49159.1.A1_atCX180149--5e+0At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinS.X.H.G.
0.1729.1PtpAffx.202668.1.S1_atpmrna5323hypothetical protein-5e+0At5g01580OSH1 (OAS HIGH ACCUMULATION 1)S.X.H.G.
0.1423.5PtpAffx.162745.1.S1_atBU827623hypothetical protein-1e-53At2g33150PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3)S.X.H.G.
0.1423.5PtpAffx.153346.1.A1_atCV261030--4e+0At5g50200WR3 (WOUND-RESPONSIVE 3)S.X.H.G.
0.1321.6Ptp.399.1.A1_atCK088846hypothetical protein-3e-8At3g61160shaggy-related protein kinase beta / ASK-beta (ASK2)S.X.H.G.
0.1321.6PtpAffx.161323.1.S1_a_atCX186124hypothetical protein-1e-53At4g31750WIN2 (HOPW1-1-INTERACTING 2)S.X.H.G.
0.1219.6PtpAffx.24402.1.S1_atCV261093hypothetical protein-2e-5At3g10360APUM4 (Arabidopsis Pumilio 4)S.X.H.G.
0.1016.3Ptp.597.1.A1_s_atCK089167hypothetical protein-1e-31At4g35260IDH1 (ISOCITRATE DEHYDROGENASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.998.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.997.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.897.4GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.196.8GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.596.1GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.794.7GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.393.7GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.691.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.470696PtpAffx.208668.1.S1_x_atpmrna17195hypothetical protein-6e-76At1g67850unknown proteinC.G.S.X.
0.680656PtpAffx.71189.3.S1_s_atCV276271hypothetical protein-2e-46At2g28310unknown proteinC.G.S.X.
0.352e-109397PtpAffx.71189.5.A1_atCV256485hypothetical protein-3e-1At3g27470unknown proteinC.G.S.X.
0.275e-48192PtpAffx.149830.1.S1_atBU895366hypothetical protein-2e-70At1g08040unknown proteinC.G.S.X.
0.293e-43176PtpAffx.50066.1.S1_atCV260350hypothetical protein-1e-22At1g67850unknown proteinC.G.S.X.
0.115e-1479PtpAffx.95597.1.A1_s_atCV240535hypothetical protein-2e-27At4g18530unknown proteinC.G.S.X.
0.077e-446PtpAffx.211968.1.S1_atpmrna23496--2e-16At4g12840unknown proteinC.G.S.X.
0.037e-136PtpAffx.95597.2.A1_atCV245096hypothetical protein-8e-9At4g18530unknown proteinC.G.S.X.
0.017e-136PtpAffx.219807.1.S1_atpmrna35917hypothetical protein-1e-64At3g53030SRPK4 (Ser/Arg-rich protein kinase 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.411e-32141Arabidopsis thalianaAt1g08040837320unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO---C.G.S.X.
0.558e-84311Glycine maxGma.16609.2.S1_atBM085783--9e-63At1g67850unknown proteinC.G.S.X.
0.331e-39163Hordeum vulgareContig17553_atContig17553--2e-34At1g08040unknown proteinC.G.S.X.
0.302e-45184Oryza sativaOs01g0971200AK064075.1-Conserved hypothetical protein4e-12At2g28310unknown proteinC.G.S.X.
0.303e-33143Triticum aestivumTa.6006.1.S1_atCK216649--9e-34At1g08040unknown proteinC.G.S.X.
0.282e-47188Vitis vinifera1618128_atCB009517hypothetical protein LOC100267242-2e-112At2g28310unknown proteinC.G.S.X.
0.414e-58224Zea maysZm.6729.2.A1_atAI395991lysine ketoglutarate reductase trans-splicing related 1-4e-23At2g28310unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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