Gene omics information

Query gene ID PtpAffx.70456.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.70456.1.A1_atCK090706hypothetical protein-2e+0At3g58600-S.X.H.G.
0.5380.5PtpAffx.213720.1.S1_atpmrna26774hypothetical protein-9e-9At3g51610unknown proteinS.X.H.G.
0.4268.6PtpAffx.87019.1.A1_atBP935009hypothetical protein-9e-14At5g19390pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing proteinS.X.H.G.
0.3661.6PtpAffx.61388.1.A1_atBP935694hypothetical protein-1e+0At5g02770unknown proteinS.X.H.G.
0.2340.5PtpAffx.88515.1.A1_atCV263318--8e-1At5g18310unknown proteinS.X.H.G.
0.1525.3PtpAffx.20182.2.S1_atCV261841--6e-3At3g06660PAPA-1-like family protein / zinc finger (HIT type) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.099.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
11.499.2GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
7.498.2GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
6.197.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
5.396.9GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.490.4GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.188.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.188.6GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.987.2GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+034PtpAffx.222472.1.S1_atpmrna39905transcription factor E2F-9e-25At5g22220-C.G.S.X.
0.022e+034PtpAffx.212845.1.S1_atpmrna25139hypothetical protein-6e-41At5g50330ATP binding / protein kinaseC.G.S.X.
0.022e+034PtpAffx.208476.1.S1_atpmrna16839hypothetical protein-8e-1At2g20515unknown proteinC.G.S.X.
0.012e+034PtpAffx.201263.1.S1_atpmrna2504hypothetical protein-4e-3At5g55390EDM2C.G.S.X.
0.022e+034Ptp.2507.1.A1_atCV228722hypothetical protein-2e-15At5g37510EMB1467 (embryo defective 1467)C.G.S.X.
0.029e+032PtpAffx.7603.2.S1_atAJ769150--2e+0At1g72510unknown proteinC.G.S.X.
0.029e+032PtpAffx.73768.1.S1_s_atCK105130hypothetical protein-7e-3At3g04630WDL1C.G.S.X.
0.019e+032PtpAffx.5132.1.S1_a_atCV239558isomerase peptidyl-prolyl cis-trans isomerase-4e-64At5g13120peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinC.G.S.X.
0.029e+032PtpAffx.29171.1.S1_atDN486239hypothetical protein-2e+0At5g23350GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt3g58600825029-F:molecular_function unknown;P:endocytosis;C:membrane;MPFO---C.G.S.X.
0.032e+034Glycine maxGma.5036.1.A1_atBM526476--3e+0At4g04630unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareContig21187_atContig21187--1e+0At3g52420OEP7 (OUTER ENVELOPE MEMBRANE PROTEIN 7)C.G.S.X.
0.023e+034Oryza sativaOs03g0668900AK108369.1-Conserved hypothetical protein6e-1At3g16770ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)C.G.S.X.
0.037e+032Triticum aestivumTaAffx.78280.1.S1_atCA734927--2e+0At5g03920unknown proteinC.G.S.X.
0.035e-134Vitis vinifera1620335_atCF404179--1e+0At2g02060transcription factorC.G.S.X.
0.027e-134Zea maysZm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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