Gene omics information

Query gene ID PtpAffx.69294.2.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8697.4PtpAffx.69294.2.S1_s_atAJ768330hypothetical protein-8e-5At1g55140RNA binding / ribonuclease IIIS.X.H.G.
0.5582.2PtpAffx.7804.3.A1_a_atCV237357hypothetical protein-4e-1At2g28755UDP-D-glucuronate carboxy-lyase-relatedS.X.H.G.
0.3964.6PtpAffx.19134.1.A1_a_atCV234594hypothetical protein-1e+0At5g13330Rap2.6L (related to AP2 6L)S.X.H.G.
0.3559.7Ptp.2295.1.A1_atCV232319hypothetical protein-6e+0At5g65510AIL7 (AINTEGUMENTA-like 7)S.X.H.G.
0.2950.5PtpAffx.24023.1.A1_atCV278448--4e-7At3g17040HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107)S.X.H.G.
0.2543.6PtpAffx.98872.1.S1_atBU819047hypothetical protein-1e+0At5g10580unknown proteinS.X.H.G.
0.2136.5PtpAffx.28304.1.S1_atBI139321hypothetical protein-5e-1At3g51370protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.1525.3Ptp.1596.1.A1_atBP929802hypothetical protein-5e-1At4g25650ACD1-LIKE (ACD1-LIKE)S.X.H.G.
0.1525.3PtpAffx.37920.2.A1_s_atCV284037thioredoxin m-3e-2At3g56420-S.X.H.G.
0.1118.1Ptp.5350.1.S1_atCV242179hypothetical protein-2e-31At2g05620PGR5 (proton gradient regulation 5)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.4GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.196.8GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
5.096.6GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.596.1GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.395.8GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.750670Ptp.7704.1.S1_atCV268846--6e-3At5g30490-C.G.S.X.
0.555e-118424PtpAffx.69294.1.A1_atCV270589hypothetical protein-8e-5At1g55140RNA binding / ribonuclease IIIC.G.S.X.
0.388e-52204PtpAffx.27083.1.A1_atCV260058--5e-1At2g21560unknown proteinC.G.S.X.
0.342e-21103PtpAffx.27083.2.S1_a_atBU815088hypothetical protein-5e-1At1g16890ubiquitin-conjugating enzyme, putativeC.G.S.X.
0.033e-550PtpAffx.3724.1.A1_s_atCV239209hypothetical protein-2e-28At1g56600AtGolS2 (Arabidopsis thaliana galactinol synthase 2)C.G.S.X.
0.033e-550PtpAffx.3724.1.A1_atCV239209hypothetical protein-2e-28At1g56600AtGolS2 (Arabidopsis thaliana galactinol synthase 2)C.G.S.X.
0.021e-448PtpAffx.208509.1.S1_atpmrna16888hypothetical protein-3e-4At5g19060-C.G.S.X.
0.012e-344PtpAffx.209031.1.S1_atpmrna17884hypothetical protein-4e-34At1g69070-C.G.S.X.
0.012e-344PtpAffx.209031.1.S1_s_atpmrna17884hypothetical protein-4e-34At1g69070-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-548Arabidopsis thalianaAt1g55140841957RNA binding / ribonuclease IIIF:RNA binding, ribonuclease III activity;P:RNA processing;C:chloroplast;BOP---C.G.S.X.
0.067e-652Glycine maxGma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.054e-548Hordeum vulgareHV_CEa0012H15r2_atHV_CEa0012H15r2--4e+0At1g11450nodulin MtN21 family proteinC.G.S.X.
0.041e-242Oryza sativaOs02g0711900BM038288-Conserved hypothetical protein6e+0At3g17130invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.042e-240Triticum aestivumTaAffx.77891.1.S1_atCA741204--3e-4At2g22200AP2 domain-containing transcription factorC.G.S.X.
0.092e-1581Vitis vinifera1607859_atCB339590hypothetical protein LOC100262522-2e-2At4g28290unknown proteinC.G.S.X.
0.048e-340Zea maysZmAffx.32.1.S1_atAI657422--3e+0At1g12020unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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