Gene omics information

Query gene ID PtpAffx.679.1.S1_s_at
Gene name peroxiredoxin
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7594.1PtpAffx.679.1.S1_s_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QS.X.H.G.
0.6187.0PtpAffx.679.1.S1_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QS.X.H.G.
0.5380.5PtpAffx.200505.1.S1_s_atpmrna1023hypothetical protein-8e-3At3g15570phototropic-responsive NPH3 family proteinS.X.H.G.
0.4067.0PtpAffx.18790.1.S1_atCV278410hypothetical protein-2e-19At4g01310ribosomal protein L5 family proteinS.X.H.G.
0.3357.5Ptp.5938.1.S1_atBU837105hypothetical protein-1e-20At1g05190emb2394 (embryo defective 2394)S.X.H.G.
0.2340.5PtpAffx.209120.1.S1_atpmrna18047hypothetical protein-2e-12At1g13820hydrolase, alpha/beta fold family proteinS.X.H.G.
0.2238.3Ptp.5948.1.S1_atCV262999hypothetical protein-2e+0At5g40370glutaredoxin, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.0GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
6.697.9GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
6.597.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.497.0GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.396.9GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.196.8GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.996.5GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.395.8GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.295.6GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
4.295.6GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9601808PtpAffx.679.1.S1_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QC.G.S.X.
0.610841Ptp.5942.1.S1_x_atCV283216peroxiredoxin-9e-46At3g26060ATPRX QC.G.S.X.
0.700823Ptp.7491.1.S1_atDN493441peroxiredoxin-2e-39At3g26060ATPRX QC.G.S.X.
0.620678PtpAffx.679.3.S1_atCV244474peroxiredoxin-3e-29At3g26060ATPRX QC.G.S.X.
0.321e-94347PtpAffx.679.2.S1_atCX171075peroxiredoxin-2e-14At3g26060ATPRX QC.G.S.X.
0.121e-1481PtpAffx.123154.1.A1_atCK090002--5e-1At2g17960unknown proteinC.G.S.X.
0.027e-136PtpAffx.734.1.A1_s_atCV280029hypothetical protein-1e+0At1g80700unknown proteinC.G.S.X.
0.017e-136PtpAffx.225288.1.S1_s_atpmrna44530hypothetical protein-4e-1At3g54940-C.G.S.X.
0.027e-136PtpAffx.21946.1.A1_a_atCV274757hypothetical protein-9e-1At3g06360AGP27C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.335e-41169Arabidopsis thalianaAt3g26060822203ATPRX Qencodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus---C.G.S.X.
0.309e-59228Glycine maxGma.3317.1.S1_a_atCD404147--2e-40At3g26060ATPRX QC.G.S.X.
0.157e-1167Hordeum vulgareContig5105_atContig5105--8e-9At3g26060ATPRX QC.G.S.X.
0.124e-654Oryza sativaOs06g0196300AK059845.1-Peroxiredoxin Q9e-12At3g26060ATPRX QC.G.S.X.
0.035e-136Triticum aestivumTaAffx.80713.1.S1_atCA693621--4e+0At3g50250unknown proteinC.G.S.X.
0.373e-95347Vitis vinifera1614204_atCD801669hypothetical protein LOC100250698-2e-58At3g26060ATPRX QC.G.S.X.
0.069e-444Zea maysZm.2236.1.S1_atBQ538247peroxiredoxin bcp-9e-9At3g26060ATPRX QC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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