Gene omics information

Query gene ID PtpAffx.6526.1.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1PtpAffx.6526.1.S1_a_atCV268340hypothetical protein-2e-34At5g08580calcium-binding EF hand family proteinS.X.H.G.
0.8096.0PtpAffx.213720.1.S1_atpmrna26774hypothetical protein-9e-9At3g51610unknown proteinS.X.H.G.
0.5078.6PtpAffx.53314.1.A1_atCV229793hypothetical protein-7e-2At1g14450unknown proteinS.X.H.G.
0.2543.6PtpAffx.70456.1.A1_atCK090706hypothetical protein-2e+0At3g58600-S.X.H.G.
0.1729.1PtpAffx.40711.1.A1_a_atDN496741hypothetical protein-3e-4At1g53040unknown proteinS.X.H.G.
0.1118.1PtpAffx.93007.2.S1_atDN492053hypothetical protein-7e-9At5g03345-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.399.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
6.697.9GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
6.297.6GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
5.396.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
4.095.3GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
3.894.9GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
2.389.8GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.088.0GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.910989PtpAffx.6526.1.S1_atCV268340hypothetical protein-2e-34At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.520680PtpAffx.205231.1.S1_s_atpmrna10371hypothetical protein-2e-34At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.520680PtpAffx.205231.1.S1_atpmrna10371hypothetical protein-2e-34At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.481e-138494PtpAffx.207178.1.S1_atpmrna14241hypothetical protein-6e-50At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.084e-24113PtpAffx.62338.1.S1_s_atCX169010hypothetical protein-3e-1At1g30475-C.G.S.X.
0.012e-138PtpAffx.225184.1.S1_atpmrna44338tir-nbs-lrr resistance protein-5e-7At1g72860disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.018e-136PtpAffx.203291.1.S1_atpmrna6522hypothetical protein-1e-13At4g11110SPA2 (SPA1-RELATED 2)C.G.S.X.
0.038e-136PtpAffx.116672.1.A1_atCK093463--3e+0At4g14305-C.G.S.X.
0.023e+034PtpAffx.825.1.A1_atCV270791--4e+0At5g01750unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.252e-34147Arabidopsis thalianaAt5g08580830759calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:plasma membrane;MPOFB---C.G.S.X.
0.023e+034Glycine maxGmaAffx.85577.2.S1_atCA784145--2e-4At1g06930unknown proteinC.G.S.X.
0.085e-961Hordeum vulgareContig22595_atContig22595--1e-3At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.091e-965Oryza sativaOs.9096.2.S1_a_at---0C.G.S.X.
0.043e-963Triticum aestivumTa.26311.1.A1_atCD490642--1e-3At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.081e-859Vitis vinifera1613846_atCF209858hypothetical protein LOC100262960-2e-2At5g08580calcium-binding EF hand family proteinC.G.S.X.
0.021e+130Zea maysZmAffx.848.1.A1_atAI770631--8e-1At1g22720wall-associated kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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