Gene omics information

Query gene ID PtpAffx.61161.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.7PtpAffx.61161.1.A1_atCV240842hypothetical protein-5e+0At5g22190unknown proteinS.X.H.G.
0.4975.7PtpAffx.11683.1.A1_atCK093713hypothetical protein-1e-13At4g30200-S.X.H.G.
0.4975.7PtpAffx.3969.1.S1_s_atCV271229hypothetical protein-1e-128At3g07890RabGAP/TBC domain-containing proteinS.X.H.G.
0.4774.6PtpAffx.14532.1.A1_atCK090232hypothetical protein-3e-2At5g64020unknown proteinS.X.H.G.
0.4673.7PtpAffx.153966.2.A1_atCV235142hypothetical protein-1e-7At1g65320CBS domain-containing proteinS.X.H.G.
0.4572.3PtpAffx.213752.1.S1_atpmrna26858glycosyltransferase, CAZy family GT8-5e-18At2g38650GAUT7 (GALACTURONOSYLTRANSFERASE 7)S.X.H.G.
0.4369.7PtpAffx.206376.1.S1_atpmrna12662hypothetical protein-3e-62At2g19400protein kinase, putativeS.X.H.G.
0.4167.7PtpAffx.225366.1.S1_x_atpmrna44671hypothetical protein-1e+0At5g26190DC1 domain-containing proteinS.X.H.G.
0.4167.7PtpAffx.119838.2.S1_atCK103747--1e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeS.X.H.G.
0.4167.7PtpAffx.75330.1.A1_s_atCV273977hypothetical protein-1e-35At5g23300PYRD (pyrimidine d)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.299.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
12.999.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
8.798.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
7.298.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.497.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.381.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
1.279.6GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.279.6GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.279.6GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.382e-52206PtpAffx.200463.1.S1_atpmrna929hypothetical protein-4e-2At5g51910TCP family transcription factor, putativeC.G.S.X.
0.032e+034PtpAffx.67467.1.S1_atAJ770672hypothetical protein-3e-1At2g44520COX10 (cytochrome c oxidase 10)C.G.S.X.
0.022e+034PtpAffx.1268.1.A1_atCK097780hypothetical protein-2e-13At1g03970GBF4C.G.S.X.
0.022e+034PtpAffx.115292.1.S1_atCA925802hypothetical protein-2e-62At5g57960GTP-binding family proteinC.G.S.X.
0.027e+032PtpAffx.7604.6.A1_atCV275490hypothetical protein-4e-1At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)C.G.S.X.
0.027e+032PtpAffx.5188.2.S1_a_atCV278830hypothetical protein-1e-38At4g35000APX3 (ASCORBATE PEROXIDASE 3)C.G.S.X.
0.027e+032PtpAffx.37259.1.A1_a_atCV276577hypothetical protein-1e-11At1g65230unknown proteinC.G.S.X.
0.017e+032PtpAffx.225463.1.S1_s_atpmrna44825hypothetical protein /// cc-nbs-lrr resistance protein-1e+0At5g47090unknown proteinC.G.S.X.
0.017e+032PtpAffx.224262.1.S1_atpmrna42662hypothetical protein-3e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt5g22190832280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.032e+034Glycine maxPsAffx.CL2231Contig1_atPsAffx.CL2231Contig1--1e+0At1g67760ATP binding / protein binding / unfolded protein bindingC.G.S.X.
0.021e+130Hordeum vulgareContig18458_atContig18458--1e+0At2g27180unknown proteinC.G.S.X.
0.022e+034Oryza sativaOs03g0593100C98108-Conserved hypothetical protein5e-1At4g29980unknown proteinC.G.S.X.
0.041e+034Triticum aestivumTa.3417.1.S1_atBJ211437--1e-1At1g79200unknown proteinC.G.S.X.
0.032e+032Vitis vinifera1612377_atCB838880--8e-1At3g22950ATARFC1 (ADP-ribosylation factor C1)C.G.S.X.
0.035e-134Zea maysZm.19110.1.A1_atCO533591hypothetical protein LOC100217228-1e+1At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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