Gene omics information

Query gene ID PtpAffx.5844.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4572.3PtpAffx.5844.1.S1_atCX174548hypothetical protein-9e-5At1g68680unknown proteinS.X.H.G.
0.6791.1Ptp.5393.1.S1_s_atBU837915hypothetical protein-1e-84At4g38510vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putativeS.X.H.G.
0.6791.1PtpAffx.15840.1.S1_s_atCV245081hypothetical protein-6e-73At3g023606-phosphogluconate dehydrogenase family proteinS.X.H.G.
0.5984.9Ptp.2004.1.A1_atCK093656--4e-42At3g13930dihydrolipoamide S-acetyltransferase, putativeS.X.H.G.
0.5884.2Ptp.3950.1.S1_atCV246811hypothetical protein-3e-8At5g57815cytochrome c oxidase subunit 6b, putativeS.X.H.G.
0.5683.9PtpAffx.450.1.S1_atCK318302hypothetical protein-2e-72At5g50850MAB1 (MACCI-BOU)S.X.H.G.
0.5582.2Ptp.2301.1.A1_atCV237242--2e-21At3g023606-phosphogluconate dehydrogenase family proteinS.X.H.G.
0.4673.7PtpAffx.212038.1.S1_s_atpmrna23631hypothetical protein-1e-153At2g20420succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeS.X.H.G.
0.4572.3PtpAffx.640.1.S1_atCV247146hypothetical protein-2e-22At5g19760dicarboxylate/tricarboxylate carrier (DTC)S.X.H.G.
0.4471.9PtpAffx.4942.2.S1_s_atCV236355hypothetical protein-1e-11At2g21160translocon-associated protein alpha (TRAP alpha) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.498.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.597.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.497.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.694.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138PtpAffx.88280.1.A1_atCV273759--5e+0At5g54410unknown proteinC.G.S.X.
0.021e-138PtpAffx.219257.1.S1_atpmrna35123hypothetical protein-2e+0At5g65480unknown proteinC.G.S.X.
0.015e-136PtpAffx.219834.1.S1_s_atpmrna35982ZIP transporter-4e-86At3g08650metal transporter family proteinC.G.S.X.
0.032e+034PtpAffx.73903.1.A1_atDN491776--4e+0At3g09290TAC1 (TELOMERASE ACTIVATOR1)C.G.S.X.
0.022e+034PtpAffx.221521.1.S1_atpmrna38448hypothetical protein-2e-11At1g72970HTH (HOTHEAD)C.G.S.X.
0.032e+034PtpAffx.212459.1.S1_atpmrna24406hypothetical protein-4e-3At1g17455ELF4-L4 (ELF4-Like 4)C.G.S.X.
0.012e+034PtpAffx.200499.1.S1_atpmrna1014anion exchanger family protein-1e-40At1g15460BOR4 (REQUIRES HIGH BORON 4)C.G.S.X.
0.038e+032PtpAffx.39512.1.A1_atCK090342hypothetical protein-9e-1At1g73840ESP1 (ENHANCED SILENCING PHENOTYPE 1)C.G.S.X.
0.028e+032PtpAffx.34170.1.S1_s_atCV245830hypothetical protein-2e-3At1g79975-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.089e-548Arabidopsis thalianaAt1g68680843198unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.131e-448Glycine maxGma.11798.1.S1_s_atBM525482--8e-2At1g68680unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareContig1150_x_atContig1150--7e-1At5g02570histone H2B, putativeC.G.S.X.
0.021e+132Oryza sativaOsAffx.26836.2.S1_at---0C.G.S.X.
0.034e-136Triticum aestivumTaAffx.15375.1.A1_atBG908375--2e-1At1g14440AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)C.G.S.X.
0.046e+030Vitis vinifera1622527_atCF202731.1--1e+1At4g36960RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.039e+030Zea maysZm.2042.2.S1_atAI673986--3e+0At4g10170synaptobrevin-related family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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