Gene omics information

Query gene ID PtpAffx.57928.2.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.57928.2.S1_atBI120751hypothetical protein-1e+0At3g52990pyruvate kinase, putativeS.X.H.G.
0.9199.2PtpAffx.82253.1.A1_atCV232973hypothetical protein-2e-20At3g52990pyruvate kinase, putativeS.X.H.G.
0.7393.6PtpAffx.45836.1.A1_atCK092162hypothetical protein-1e-2At5g51010rubredoxin family proteinS.X.H.G.
0.6791.1PtpAffx.13918.1.S1_atCV262227hypothetical protein-1e+0At1g44750ATPUP11S.X.H.G.
0.4369.7Ptp.2607.2.S1_a_atBU894129hypothetical protein-1e+0At2g03850late embryogenesis abundant domain-containing protein / LEA domain-containing proteinS.X.H.G.
0.4067.0PtpAffx.212292.1.S1_atpmrna24100hypothetical protein-2e+0At4g34170kelch repeat-containing F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.8100.0GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
20.699.8GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
6.597.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
6.297.6GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
1.583.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
1.381.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.311e-154545PtpAffx.207584.1.S1_atpmrna15052hypothetical protein-3e-56At2g36580pyruvate kinase, putativeC.G.S.X.
0.412e-144511PtpAffx.57928.1.S1_s_atCK319492hypothetical protein-1e-33At2g36580pyruvate kinase, putativeC.G.S.X.
0.385e-37155PtpAffx.207586.1.S1_atpmrna15055hypothetical protein-3e-1At1g51355unknown proteinC.G.S.X.
0.237e-1891Ptp.4195.1.S1_atBU881509hypothetical protein-2e-25At3g52990pyruvate kinase, putativeC.G.S.X.
0.013e-136PtpAffx.212325.1.S1_s_atpmrna24169--4e-1At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)C.G.S.X.
0.041e+034PtpAffx.85736.1.S1_atDN491290hypothetical protein-8e-25At5g15310ATMYB16 (MYB DOMAIN PROTEIN 16)C.G.S.X.
0.041e+034PtpAffx.213530.1.S1_atpmrna26442hypothetical protein-2e-8At3g52990pyruvate kinase, putativeC.G.S.X.
0.035e+032PtpAffx.95213.1.A1_atCV256287hypothetical protein-1e-20At3g06730thioredoxin family proteinC.G.S.X.
0.025e+032PtpAffx.34653.1.S1_atDN500767--2e+0At4g25570ACYB-2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e+034Arabidopsis thalianaAt3g52990824465pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:response to cadmium ion, glycolysis;C:membrane;BOMPFA---C.G.S.X.
0.338e-36151Glycine maxGmaAffx.92647.1.S1_s_atCF807455--1e+0At3g61763unknown proteinC.G.S.X.
0.055e-134Hordeum vulgareHU13K14u_atHU13K14u--4e-2At2g30530unknown proteinC.G.S.X.
0.028e+032Oryza sativaOsAffx.4622.1.S1_at---0C.G.S.X.
0.043e-136Triticum aestivumTa.12068.1.S1_atBQ171514--4e+0At3g21700SGP2C.G.S.X.
0.047e-236Vitis vinifera1618125_atBQ798742hypothetical protein LOC100261276-9e-23At2g36580pyruvate kinase, putativeC.G.S.X.
0.033e+128Zea maysZmAffx.1040.1.A1_atAI881777--3e+0At1g49590formin-binding protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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