Gene omics information

Query gene ID PtpAffx.5626.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.5626.1.A1_atCV261500hypothetical protein-4e-17At1g22070TGA3S.X.H.G.
0.8096.0PtpAffx.5626.4.S1_a_atCV240734hypothetical protein-2e-9At1g22070TGA3S.X.H.G.
0.5380.5PtpAffx.5626.3.S1_atBU871093hypothetical protein-1e+0At4g32714SCRL25 (SCR-Like 25)S.X.H.G.
0.4471.9PtpAffx.82395.1.S1_s_atCV248397hypothetical protein-7e-7At3g02050KUP3 (K+ UPTAKE TRANSPORTER 3)S.X.H.G.
0.4067.0PtpAffx.58636.1.S1_atCK096620SET domain protein-2e-44At4g02020SWN (SWINGER)S.X.H.G.
0.3661.6PtpAffx.145392.1.A1_atBP929941hypothetical protein-1e-13At3g20500PAP18 (PURPLE ACID PHOSPHATASE 18)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.195.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9702103PtpAffx.5626.1.A1_a_atCV261500hypothetical protein-4e-17At1g22070TGA3C.G.S.X.
0.640646PtpAffx.5626.4.S1_a_atCV240734hypothetical protein-2e-9At1g22070TGA3C.G.S.X.
0.125e-859Ptp.8132.1.A1_atDN503748hypothetical protein-6e-6At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)C.G.S.X.
0.028e-136PtpAffx.37970.1.S1_atCV231904hypothetical protein-3e+0At3g50123unknown proteinC.G.S.X.
0.128e-136PtpAffx.21973.1.A1_atCV257905hypothetical protein-3e-8At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)C.G.S.X.
0.028e-136PtpAffx.208006.1.S1_atpmrna15888hypothetical protein-4e-33At1g68640PAN (PERIANTHIA)C.G.S.X.
0.018e-136PtpAffx.200655.1.S1_s_atpmrna1274hypothetical protein-9e-26At4g29130HXK1 (HEXOKINASE 1)C.G.S.X.
0.018e-136PtpAffx.200655.1.S1_atpmrna1274hypothetical protein-9e-26At4g29130HXK1 (HEXOKINASE 1)C.G.S.X.
0.028e-136Ptp.3311.1.S1_atBU862422hypothetical protein-1e+0At5g63060transporterC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.224e-1789Arabidopsis thalianaAt1g22070838812TGA3Encodes a transcription factor. Like other TGAla-related factors, TGA3 has a highly conserved bZIP region and exhibits similar DNA-binding properties.---C.G.S.X.
0.112e-757Glycine maxGma.46.1.S1_atL28005.1bZIP transcription factor bZIP52 /// transcription factor bZIP76-4e-6At5g10030TGA4 (TGACG MOTIF-BINDING FACTOR 4)C.G.S.X.
0.021e-344Hordeum vulgareContig5909_atContig5909--4e-12At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.043e-138Oryza sativaOs01g0279900AB051296.1-Basic-leucine zipper (bZIP) transcription factordomain containing protein6e-11At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.026e-136Triticum aestivumTaAffx.614.1.S1_atBQ168765--2e+0At3g02500unknown proteinC.G.S.X.
0.041e-859Vitis vinifera1614530_atCF604399hypothetical protein LOC100255706-4e+0At3g11405unknown proteinC.G.S.X.
0.052e-136Zea maysZm.129.1.S1_atCK369371ocs-element binding factor 3.1-5e-11At1g68640PAN (PERIANTHIA)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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