Gene omics information

Query gene ID PtpAffx.5585.2.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.5585.2.A1_atCV260093hypothetical protein-5e-7At4g27700rhodanese-like domain-containing proteinS.X.H.G.
0.8397.0PtpAffx.224403.1.S1_atpmrna42899hypothetical protein-7e-80Atcg01300-S.X.H.G.
0.6791.1PtpAffx.249.460.S1_atAJ773062hypothetical protein-2e-11At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)S.X.H.G.
0.6791.1PtpAffx.210506.1.S1_x_atpmrna20610hypothetical protein-1e-43At1g74470geranylgeranyl reductaseS.X.H.G.
0.6086.0PtpAffx.30291.1.A1_atCV283979--2e-5At1g79040PSBR (photosystem II subunit R)S.X.H.G.
0.4067.0PtpAffx.210506.1.S1_atpmrna20610hypothetical protein-1e-43At1g74470geranylgeranyl reductaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.2100.0GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
9.898.9GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
6.497.7GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
5.296.8GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.092.9GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.590.9GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.188.6GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.484e-113408PtpAffx.5585.1.S1_atCV280308hypothetical protein-3e-24At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.484e-113408PtpAffx.5585.1.S1_a_atCV280308hypothetical protein-3e-24At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.094e-240PtpAffx.116760.1.A1_atCK089500--9e+0At3g49920VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5)C.G.S.X.
0.032e-138PtpAffx.32868.1.A1_atCK096880hypothetical protein-2e-9At1g32120unknown proteinC.G.S.X.
0.026e-136PtpAffx.224785.1.S1_atpmrna43634hypothetical protein-4e-1At2g32800AP4.3AC.G.S.X.
0.016e-136PtpAffx.224786.1.S1_atpmrna43635hypothetical protein-3e-5At5g39390leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.036e-136PtpAffx.222670.1.S1_x_atpmrna40223hypothetical protein-7e-1At1g14370APK2A (PROTEIN KINASE 2A)C.G.S.X.
0.036e-136PtpAffx.222670.1.S1_atpmrna40223hypothetical protein-7e-1At1g14370APK2A (PROTEIN KINASE 2A)C.G.S.X.
0.036e-136PtpAffx.122315.1.S1_atBU896709hypothetical protein-4e+0At5g01075beta-galactosidaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.245e-756Arabidopsis thalianaAt4g27700828884rhodanese-like domain-containing proteinF:molecular_function unknown;P:aging;C:chloroplast thylakoid membrane, chloroplast;BPOA---C.G.S.X.
0.297e-50198Glycine maxGma.2446.1.S1_a_atCD393550--3e-27At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.191e-1583Hordeum vulgareContig7298_atContig7298--6e-13At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.152e-1791Oryza sativaOs09g0530000AK062568.1-Rhodanese-like domain containing protein2e-7At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.211e-29131Triticum aestivumTa.26822.1.A1_atCD491337--2e-8At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.259e-46182Vitis vinifera1607381_atCB973030hypothetical protein LOC100245212-7e-5At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.192e-22105Zea maysZm.8887.1.A1_atBM336157rhodanese-like domain containing protein-1e-7At4g27700rhodanese-like domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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