Gene omics information

Query gene ID PtpAffx.5471.1.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.5471.1.A1_a_atCV252337hypothetical protein-3e-15At3g09640APX2 (ASCORBATE PEROXIDASE 2)S.X.H.G.
0.6086.0Ptp.1502.1.S1_a_atCV234701hypothetical protein-2e-11At1g51200zinc finger (AN1-like) family proteinS.X.H.G.
0.5984.9PtpAffx.4277.1.S1_a_atCV265521--1e-131At3g02520GRF7 (GENERAL REGULATORY FACTOR 7)S.X.H.G.
0.5784.2PtpAffx.21710.1.S1_s_atCV230014hypothetical protein-8e-120At1g10630ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)S.X.H.G.
0.4471.9PtpAffx.1258.4.S1_s_atCF232778actin 1 /// actin 9-0At5g09810ACT7 (ACTIN 7)S.X.H.G.
0.4067.0Ptp.4306.1.S1_atCV225469hypothetical protein-5e-78At5g53300UBC10 (ubiquitin-conjugating enzyme 10)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.892.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
1.987.2GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
1.987.2GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
1.886.4GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
1.886.4GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.886.4GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.886.4GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.886.4GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9301869PtpAffx.5471.1.A1_s_atCV252337hypothetical protein-3e-15At3g09640APX2 (ASCORBATE PEROXIDASE 2)C.G.S.X.
0.530858PtpAffx.5471.2.A1_atCV246054--4e-13At3g09640APX2 (ASCORBATE PEROXIDASE 2)C.G.S.X.
0.331e-126454PtpAffx.5471.3.A1_atCV259746hypothetical protein-4e-7At3g09640APX2 (ASCORBATE PEROXIDASE 2)C.G.S.X.
0.292e-47190Ptp.1376.1.S1_atCV225839hypothetical protein-6e-54At3g09640APX2 (ASCORBATE PEROXIDASE 2)C.G.S.X.
0.312e-35151PtpAffx.117027.1.S1_a_atCV232507hypothetical protein-5e-29At3g09640APX2 (ASCORBATE PEROXIDASE 2)C.G.S.X.
0.025e-240Ptp.7040.1.S1_atDN488600--2e-12At4g35000APX3 (ASCORBATE PEROXIDASE 3)C.G.S.X.
0.022e-138PtpAffx.211247.1.S1_atpmrna22075hypothetical protein-2e-3At1g71340glycerophosphoryl diester phosphodiesterase family proteinC.G.S.X.
0.028e-136PtpAffx.65083.1.A1_atCK095236--2e+1At5g14440-C.G.S.X.
0.038e-136PtpAffx.5188.2.S1_a_atCV278830hypothetical protein-1e-38At4g35000APX3 (ASCORBATE PEROXIDASE 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.373e-1583Arabidopsis thalianaAt3g09640820121APX2 (ASCORBATE PEROXIDASE 2)Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.---C.G.S.X.
0.367e-29129Glycine maxGma.13160.1.S1_atL10292.1ascorbate peroxidase 1, cytosolic-5e-23At1g07890APX1 (ascorbate peroxidase 1)C.G.S.X.
0.302e-30133Hordeum vulgareContig1727_s_atContig1727--1e-17At1g07890APX1 (ascorbate peroxidase 1)C.G.S.X.
0.352e-36155Oryza sativaOs07g0694700AB050724.1-Ascorbate peroxidase (EC 1.11.1.11)4e-25At1g07890APX1 (ascorbate peroxidase 1)C.G.S.X.
0.276e-35149Triticum aestivumTaAffx.129513.2.A1_x_atBJ306606--5e-18At1g07890APX1 (ascorbate peroxidase 1)C.G.S.X.
0.225e-48190Vitis vinifera1606498_s_atCF214775ascorbate peroxidase-7e-22At3g09640APX2 (ASCORBATE PEROXIDASE 2)C.G.S.X.
0.383e-50198Zea maysZm.3633.8.A1_atAI881249--7e-29At1g07890APX1 (ascorbate peroxidase 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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