Gene omics information

Query gene ID PtpAffx.5430.3.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.5430.3.S1_a_atCV242643hypothetical protein-1e-112At1g19910AVA-P2S.X.H.G.
0.5078.6PtpAffx.6381.1.S1_atCV265918integral membrane single C2 domain protein /// integral membrane single C2 domain protein-6e-10At3g61050NTMC2T4S.X.H.G.
0.5078.6Ptp.2592.2.S1_x_atCX185841thioredoxin h-8e-6At1g45145ATTRX5S.X.H.G.
0.4471.9PtpAffx.48549.1.A1_atCK096134hypothetical protein-2e-17At2g16800high-affinity nickel-transport family proteinS.X.H.G.
0.2340.5PtpAffx.34296.2.S1_atCV256170hypothetical protein-8e-6At3g28140calmodulin-binding proteinS.X.H.G.
0.1423.5Ptp.514.1.A1_s_atCV258507hypothetical protein-2e-18At2g20360binding / catalytic/ coenzyme bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.594.3GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.393.7GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.393.7GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.193.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.590.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.590.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.490.4GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6001074PtpAffx.5430.4.S1_a_atCX170063hypothetical protein-4e-116At1g19910AVA-P2C.G.S.X.
0.660801PtpAffx.5430.1.S1_atCF228221hypothetical protein-1e-103At1g19910AVA-P2C.G.S.X.
0.660801PtpAffx.5430.1.S1_x_atCF228221hypothetical protein-1e-103At1g19910AVA-P2C.G.S.X.
0.432e-80299PtpAffx.56733.1.A1_s_atCV256568hypothetical protein-5e-90At1g75630AVA-P4C.G.S.X.
0.391e-75284Ptp.800.1.S1_s_atCV275558--5e-115At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)C.G.S.X.
0.351e-72274Ptp.2450.1.S1_atCV258657hypothetical protein-9e-111At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)C.G.S.X.
0.468e-68258PtpAffx.909.1.S1_a_atCX175894hypothetical protein-4e-69At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)C.G.S.X.
0.045e-136PtpAffx.43824.2.A1_atCK088998--7e+0At5g53610glycosyl hydrolase family protein 17C.G.S.X.
0.025e-136PtpAffx.43824.1.S1_atCV257164hypothetical protein-3e-11At5g64200ATSC35C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.671e-112406Arabidopsis thalianaAt1g19910838579AVA-P2vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2)---C.G.S.X.
0.509e-83307Glycine maxGmaAffx.92173.1.S1_s_atCF807898--6e-86At4g34720AVA-P1C.G.S.X.
0.453e-62238Hordeum vulgareContig2159_atContig2159--7e-68At1g75630AVA-P4C.G.S.X.
0.417e-32139Oryza sativaOs12g0168900AK071641.1--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)C.G.S.X.
0.553e-57222Triticum aestivumTaAffx.85981.4.S1_atCA626243--2e-60At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)C.G.S.X.
0.492e-80297Vitis vinifera1606789_atCF415022similar to vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)-7e-83At4g34720AVA-P1C.G.S.X.
0.423e-61234Zea maysZm.1067.1.A1_atBM267163V-type H+-ATPase-3e-70At1g75630AVA-P4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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