Gene omics information

Query gene ID PtpAffx.52716.3.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.52716.3.A1_atCV259272hypothetical protein-4e+0At2g20605-S.X.H.G.
0.2340.5Ptp.2766.1.S1_s_atCX184787hypothetical protein-2e-2At1g30620MUR4 (MURUS 4)S.X.H.G.
0.1423.5Ptp.4976.1.A1_atCV267703hypothetical protein-7e-3At1g31440SH3 domain-containing protein 1 (SH3P1)S.X.H.G.
0.1321.6PtpAffx.201967.1.S1_atpmrna3927sucrose proton symporter-1e-30At1g09960SUT4 (SUCROSE TRANSPORTER 4)S.X.H.G.
0.0711.6Ptp.5049.2.S1_s_atBU888047hypothetical protein-5e+0At5g59305unknown proteinS.X.H.G.
0.069.8PtpAffx.200651.1.S1_atpmrna1267hypothetical protein-3e-6At3g16350myb family transcription factorS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.299.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
7.098.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
5.497.0GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.196.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
1.987.2GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.470759PtpAffx.52716.2.A1_s_atCV260868hypothetical protein-2e-40At5g17380pyruvate decarboxylase family proteinC.G.S.X.
0.291e-170599PtpAffx.203945.1.S1_atpmrna7783hypothetical protein-7e-45At5g17380pyruvate decarboxylase family proteinC.G.S.X.
0.021e+034PtpAffx.53274.1.A1_atDN492233hypothetical protein-3e-6At2g04020GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.011e+034PtpAffx.221980.1.S1_atpmrna39137hypothetical protein-5e-71At3g51070dehydration-responsive protein-relatedC.G.S.X.
0.031e+034PtpAffx.211769.1.S1_atpmrna23080hypothetical protein-1e-1At4g25700BETA-OHASE 1 (BETA-HYDROXYLASE 1)C.G.S.X.
0.011e+034PtpAffx.211762.1.S1_atpmrna23059multidrug resistance protein ABC transporter family-5e-29At3g62700ATMRP10C.G.S.X.
0.011e+034PtpAffx.207700.1.S1_s_atpmrna15279hypothetical protein-1e-44At3g12590unknown proteinC.G.S.X.
0.011e+034PtpAffx.207700.1.S1_atpmrna15279hypothetical protein-1e-44At3g12590unknown proteinC.G.S.X.
0.011e+034PtpAffx.207395.1.S1_atpmrna14671hypothetical protein-3e-63At3g51070dehydration-responsive protein-relatedC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt2g206055007890-Encodes a Plant thionin family protein---C.G.S.X.
0.045e+032Glycine maxGmaAffx.1301.122.A1_s_atCD401663--8e-10At4g269102-oxoacid dehydrogenase family proteinC.G.S.X.
0.052e+032Hordeum vulgareContig16253_atContig16253--7e+0At5g48515-C.G.S.X.
0.022e+034Oryza sativaOs02g0789100CR280795-Cyclic nucleotide-binding domain containingprotein9e-1At3g30260AGL79 (AGAMOUS-LIKE 79)C.G.S.X.
0.044e+032Triticum aestivumTaAffx.6561.1.S1_atCA683076--3e+0At2g33380RD20 (RESPONSIVE TO DESSICATION 20)C.G.S.X.
0.054e-340Vitis vinifera1622542_a_atBQ796994oxalyl-CoA decarboxylase-like-5e-9At5g17380pyruvate decarboxylase family proteinC.G.S.X.
0.046e+030Zea maysZm.6234.2.A1_atAI881460--8e-7At2g30110ATUBA1C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage