Gene omics information

Query gene ID PtpAffx.50507.1.A1_s_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4774.6PtpAffx.50507.1.A1_s_atCV247777--2e-18At5g55290ATP synthase subunit H family proteinS.X.H.G.
0.5582.2PtpAffx.9076.1.A1_atCV252324hypothetical protein-1e-30At2g43070protease-associated (PA) domain-containing proteinS.X.H.G.
0.3661.6PtpAffx.98987.1.S1_s_atDN500449hypothetical protein-1e+0At5g16453-S.X.H.G.
0.3357.5Ptp.4967.1.A1_atCV228163hypothetical protein-2e-20At5g51430EYE (EMBRYO YELLOW)S.X.H.G.
0.1423.5PtpAffx.12848.1.S1_atDN484571hypothetical protein-3e-11At2g37410ATTIM17-2S.X.H.G.
0.1321.6Ptp.273.1.S1_atCK087938hypothetical protein-2e-24At3g42050vacuolar ATP synthase subunit H family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.293.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.490.4GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.987.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.987.2GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.517e-105381Ptp.6175.2.S1_atCV246158hypothetical protein-3e-17At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.474e-103375Ptp.6175.1.S1_a_atCV249693hypothetical protein-4e-19At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.021e-138PtpAffx.3867.1.A1_atCV280837hypothetical protein-4e-15At3g12120FAD2 (FATTY ACID DESATURASE 2)C.G.S.X.
0.021e-138PtpAffx.3867.1.A1_x_atCV280837hypothetical protein-4e-15At3g12120FAD2 (FATTY ACID DESATURASE 2)C.G.S.X.
0.035e-136PtpAffx.201580.1.S1_atpmrna3101hypothetical protein-1e+0At2g14920ST4A (SULFOTRANSFERASE 4A)C.G.S.X.
0.032e+034PtpAffx.98398.1.A1_s_atAJ778498hypothetical protein-6e-24At1g54290eukaryotic translation initiation factor SUI1, putativeC.G.S.X.
0.012e+034PtpAffx.220201.1.S1_atpmrna36558hypothetical protein-1e+0At1g69230SP1L2 (SPIRAL1-LIKE2)C.G.S.X.
0.012e+034PtpAffx.206048.1.S1_atpmrna11985hypothetical protein-6e-68At3g56690CIP111 (CAM INTERACTING PROTEIN 111)C.G.S.X.
0.032e+034PtpAffx.16258.1.S1_atDN493080hypothetical protein-7e-6At4g37670GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.222e-1893Arabidopsis thalianaAt5g55290835622ATP synthase subunit H family proteinF:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOF---C.G.S.X.
0.236e-1375Glycine maxGma.7079.1.S1_s_atBU577711--2e-5At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.067e-444Hordeum vulgareContig6470_atContig6470--1e-3At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.082e-448Oryza sativaOs04g0660600AK120899.1-ATP synthase subunit H family protein3e-10At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.049e-238Triticum aestivumTa.5109.3.S1_atCA697843Plasma membrane H+-ATPase subunit H-9e-6At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.193e-2097Vitis vinifera1611174_atCD801315hypothetical protein LOC100255548-3e-10At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.042e+032Zea maysZm.820.3.S1_atAI691700Hypothetical protein LOC100216625-8e-1At5g45130RHA1 (RAB HOMOLOG 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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