Gene omics information

Query gene ID PtpAffx.47668.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.47668.1.A1_atCV254098hypothetical protein-2e-9At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeS.X.H.G.
0.4067.0PtpAffx.203696.1.S1_atpmrna7321--2e-19At4g21760BGLU47 (Beta-glucosidase 47)S.X.H.G.
0.3661.6PtpAffx.219994.1.S1_atpmrna36219hypothetical protein-6e-2At1g09932phosphoglycerate/bisphosphoglycerate mutase-relatedS.X.H.G.
0.2543.6PtpAffx.210127.1.S1_atpmrna19956hypothetical protein-7e-21At3g15850FAD5 (FATTY ACID DESATURASE 5)S.X.H.G.
0.2340.5PtpAffx.100056.1.A1_atBP932830--1e+0At5g63085-S.X.H.G.
0.1219.6PtpAffx.214717.1.S1_s_atpmrna28543hypothetical protein-4e-5At1g18390ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.899.9GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
20.699.8GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.796.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.995.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.590.9GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-448Ptp.501.1.A1_atCK087671--2e-1At5g63710leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.022e+034PtpAffx.219403.1.S1_atpmrna35323--2e-1At2g33050AtRLP26 (Receptor Like Protein 26)C.G.S.X.
0.022e+034PtpAffx.219403.1.S1_s_atpmrna35323hypothetical protein-2e-1At2g33050AtRLP26 (Receptor Like Protein 26)C.G.S.X.
0.012e+034PtpAffx.215909.1.S1_atpmrna30374--3e-1At5g49290protein bindingC.G.S.X.
0.012e+034PtpAffx.207232.1.S1_atpmrna14340hypothetical protein-3e-32At1g16540ABA3 (ABA DEFICIENT 3)C.G.S.X.
0.022e+034PtpAffx.164020.1.S1_atCK318557hypothetical protein-6e-1At3g1358060S ribosomal protein L7 (RPL7D)C.G.S.X.
0.022e+034Ptp.5930.1.S1_s_atBU816698hypothetical protein-6e-4At1g37130NIA2 (NITRATE REDUCTASE 2)C.G.S.X.
0.022e+034Ptp.3265.1.S1_atDN485794--4e-4At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)C.G.S.X.
0.022e+034Ptp.10.1.A1_atCK087557hypothetical protein-4e-1At1g37130NIA2 (NITRATE REDUCTASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-963Arabidopsis thalianaAt3g16150820860L-asparaginase, putative / L-asparagine amidohydrolase, putativeF:asparaginase activity;P:glycoprotein catabolic process;C:cellular_component unknown;BOMFPA---C.G.S.X.
0.176e-756Glycine maxGma.1179.1.S1_atAY096000.1L-asparaginase-5e-39At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.033e+032Hordeum vulgareHY03E10u_s_atHY03E10u--1e+1At5g63060transporterC.G.S.X.
0.033e+034Oryza sativaOs02g07473009630.m05036--1e+0At1g15760-C.G.S.X.
0.034e-136Triticum aestivumTa.3504.1.A1_atCK163751--1e+0At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.335e-50196Vitis vinifera1614789_atBQ799243hypothetical protein LOC100248834-7e-9At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.031e+130Zea maysZm.7969.2.S1_x_atAI714862--1e+1At4g23895pleckstrin homology (PH) domain-containing protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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