Gene omics information

Query gene ID PtpAffx.4579.1.S1_at
Gene name precursor of carboxylase h-protein 4, glycine decarboxylase complex
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5279.4PtpAffx.4579.1.S1_atBU869151precursor of carboxylase h-protein 4, glycine decarboxylase complex-4e-29At2g35370GDCHS.X.H.G.
0.7192.6Ptp.5340.1.S1_atCV252953--8e-6At3g54210ribosomal protein L17 family proteinS.X.H.G.
0.6791.1PtpAffx.17571.1.A1_atCV277470hypothetical protein-1e-14At3g55330PPL1 (PsbP-like protein 1)S.X.H.G.
0.5784.2Ptp.3375.1.S1_atCV281370hypothetical protein-7e-6At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)S.X.H.G.
0.5683.9PtpAffx.26613.1.S1_atCX175693hypothetical protein-9e-52At4g18480CHLI1S.X.H.G.
0.3964.6Ptp.5722.1.S1_atCV226697hypothetical protein-2e-15At1g64510ribosomal protein S6 family proteinS.X.H.G.
0.3559.7PtpAffx.40844.1.S1_atCV233738--1e-4At3g61870unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.197.6GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.596.1GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
4.395.8GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.195.5GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.095.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.095.3GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.095.3GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.794.7GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.694.5GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.694.5GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.530636Ptp.3793.1.S1_s_atAY369261.1precursor of carboxylase h-protein 3, glycine decarboxylase complex-9e-12At2g35370GDCHC.G.S.X.
0.530636Ptp.3793.1.S1_atAY369261.1precursor of carboxylase h-protein 3, glycine decarboxylase complex-9e-12At2g35370GDCHC.G.S.X.
0.051e-448PtpAffx.466.2.A1_atCV229409precursor of carboxylase h-protein 1, glycine decarboxylase complex-2e-3At2g35120glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.051e-448Ptp.7456.1.S1_s_atAY229875.1precursor of carboxylase h-protein 1, glycine decarboxylase complex-2e-3At2g35120glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.051e-138PtpAffx.466.1.S1_atCV245175precursor of carboxylase h-protein 2, glycine decarboxylase complex-8e-6At2g35120glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.016e-136PtpAffx.224776.1.S1_atpmrna43620hypothetical protein-1e-21At4g03230ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingC.G.S.X.
0.022e+034PtpAffx.75141.1.S1_atDN501057glutathione peroxidase-5e-47At1g63460glutathione peroxidase, putativeC.G.S.X.
0.022e+034PtpAffx.35479.1.S1_atDN489262--6e-1At3g21680unknown proteinC.G.S.X.
0.032e+034PtpAffx.221787.1.S1_atpmrna38839hypothetical protein-6e-1At2g1045014-3-3 protein, putative / grf15, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.384e-29129Arabidopsis thalianaAt2g35370818104GDCHEncodes glycine decarboxylase complex H protein. Involved in photorespiration.---C.G.S.X.
0.349e-652Glycine maxGma.10591.1.S1_atCD415483--6e-28At1g32470glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.131e-859Hordeum vulgareContig5029_atContig5029--1e-4At2g35120glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.232e-1067Oryza sativaOs10g0516100AF022731.1-Glycine decarboxylase complex H-protein3e-8At1g32470glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.103e-550Triticum aestivumTa.2304.1.S1_atCD932249--1e-1At2g35120glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.503e-82303Vitis vinifera1619879_s_atCB340231hypothetical protein LOC100259229-4e-32At1g32470glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
0.147e-444Zea maysZm.7973.1.S1_atAY104213.1hypothetical protein LOC100273340-8e-9At2g35120glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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