Gene omics information

Query gene ID PtpAffx.450.5.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.450.5.A1_atCV278124hypothetical protein-2e-56At5g50850MAB1 (MACCI-BOU)S.X.H.G.
0.7192.6PtpAffx.56923.1.S1_atBI123150hypothetical protein-2e-77At3g24090glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminaseS.X.H.G.
0.5784.2PtpAffx.104716.1.S1_a_atCK096563hypothetical protein-3e-8At4g16444unknown proteinS.X.H.G.
0.5582.2PtpAffx.454.7.A1_s_atCV281713hypothetical protein-2e-100At3g56800CAM3 (CALMODULIN 3)S.X.H.G.
0.5078.6PtpAffx.5252.1.A1_atCV259090hypothetical protein-3e-61At3g22845emp24/gp25L/p24 protein-relatedS.X.H.G.
0.5078.6Ptp.5782.1.S1_atCV271204hypothetical protein-2e-77At5g47200ATRAB1AS.X.H.G.
0.4369.7Ptp.1042.1.A1_atCV266554hypothetical protein-4e-1At1g16170unknown proteinS.X.H.G.
0.3964.6Ptp.2415.1.A1_s_atCX175044hypothetical protein-6e-13At3g23300dehydration-responsive protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.598.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.996.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.594.3GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.494.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.892.1GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.892.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9601955PtpAffx.450.5.A1_a_atCV278124hypothetical protein-2e-56At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.6001326PtpAffx.450.1.S1_atCK318302hypothetical protein-2e-72At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.6001326PtpAffx.450.1.S1_a_atCK318302hypothetical protein-2e-72At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.172e-72274PtpAffx.450.6.S1_a_atCN519032hypothetical protein-6e-58At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.096e-45182Ptp.5765.3.S1_atCV264842hypothetical protein-9e-12At1g3312060S ribosomal protein L9 (RPL90B)C.G.S.X.
0.126e-42173Ptp.5765.1.S1_s_atCV236333hypothetical protein-3e-30At1g33140PGY2 (PIGGYBACK2)C.G.S.X.
0.126e-42173Ptp.5765.1.S1_x_atCV236333hypothetical protein-3e-30At1g33140PGY2 (PIGGYBACK2)C.G.S.X.
0.047e-1169PtpAffx.201424.1.S1_s_atpmrna2813hypothetical protein-5e-8At4g38120bindingC.G.S.X.
0.031e-346Ptp.1379.1.S1_a_atCV263139hypothetical protein-1e-26At1g33140PGY2 (PIGGYBACK2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.462e-56220Arabidopsis thalianaAt5g50850835157MAB1 (MACCI-BOU)F:pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity;P:defense response to bacterium;C:mitochondrion, nucleolus, plasma membrane;BOMPFA---C.G.S.X.
0.500670Glycine maxGma.11089.1.S1_atAI855657--7e-53At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.391e-65250Hordeum vulgareContig3299_s_atContig3299--8e-47At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.396e-46186Oryza sativaOs09g0509200AK061863.1-Pyruvate dehydrogenase E1 beta subunit isoform 3(EC 1.2.4.1)5e-42At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.351e-54214Triticum aestivumTa.4804.1.S1_x_atCK201081--7e-29At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.382e-112404Vitis vinifera1609000_atCF203971.1hypothetical protein LOC100264409-4e-23At5g50850MAB1 (MACCI-BOU)C.G.S.X.
0.389e-60230Zea maysZm.433.1.A1_atAF069908.1pyruvate dehydrogenase2-1e-43At5g50850MAB1 (MACCI-BOU)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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