Gene omics information

Query gene ID PtpAffx.4493.1.A1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.4493.1.A1_x_atCV237113hypothetical protein-6e-1At2g10940protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.4067.0PtpAffx.206091.1.S1_atpmrna12066hypothetical protein-5e-13At3g10185-S.X.H.G.
0.3255.2PtpAffx.8983.1.S1_atBU791127hypothetical protein-3e+0At1g35333unknown proteinS.X.H.G.
0.3153.7PtpAffx.159473.1.A1_atCV271780hypothetical protein-2e-3At3g18050unknown proteinS.X.H.G.
0.2238.3PtpAffx.5253.1.A1_atCV255813--2e+0At4g32105galactosyltransferaseS.X.H.G.
0.2238.3PtpAffx.25004.4.S1_a_atCV237911hypothetical protein-1e-3At5g01870lipid transfer protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.298.8GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.698.6GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.598.6GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
7.998.4GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
6.397.7GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
6.297.6GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.296.8GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.096.6GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.796.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.596.1GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9401451PtpAffx.4493.1.A1_a_atCV237113hypothetical protein-6e-1At2g10940protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.481e-135484PtpAffx.4493.3.S1_s_atCV237188hypothetical protein-4e-1At1g36940unknown proteinC.G.S.X.
0.401e-129464PtpAffx.4493.2.A1_atCV251495hypothetical protein-6e-1At2g10940protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.216e-73276PtpAffx.4493.4.A1_atCV262264--8e-1At5g43570serine-type endopeptidase inhibitorC.G.S.X.
0.153e-22107Ptp.2250.1.S1_atCK090010--9e-1At2g10940protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.032e-138PtpAffx.71555.1.A1_atCK089998--1e+1At5g26622beta-galactosidaseC.G.S.X.
0.022e-138PtpAffx.210365.1.S1_x_atpmrna20372hypothetical protein-1e+0At4g38130HD1 (HISTONE DEACETYLASE 1)C.G.S.X.
0.019e-136PtpAffx.22200.2.S1_atCV241652hypothetical protein-2e-19At5g26200mitochondrial substrate carrier family proteinC.G.S.X.
0.019e-136PtpAffx.208682.1.S1_atpmrna17220hypothetical protein-8e-1At2g26720plastocyanin-like domain-containing protein / mavicyanin, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-136Arabidopsis thalianaAt2g10940815558protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:chloroplast thylakoid membrane, apoplast, chloroplast, membrane;MBPOFVA---C.G.S.X.
0.235e-24113Glycine maxGma.1494.2.S1_a_atAW349894auxin down regulated-1e-1At1g12100lipid bindingC.G.S.X.
0.023e-136Hordeum vulgareHVSMEa0008L11r2_atHVSMEa0008L11r2--2e-1At3g50960PLP3a (Phosducin-like protein 3 homolog)C.G.S.X.
0.025e+034Oryza sativaOs09g04805009637.m02705--2e-1At1g74430MYB95 (myb domain protein 95)C.G.S.X.
0.033e-344Triticum aestivumTa.13771.1.S1_atAL820976--3e+0At1g70440SRO3 (SIMILAR TO RCD ONE 3)C.G.S.X.
0.223e-28125Vitis vinifera1615201_atCF415287hypothetical protein LOC100257854-2e-4At3g22120CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)C.G.S.X.
0.021e+034Zea maysZm.19048.1.A1_atAI857148carbohydrate transporter/ sugar porter-1e+0At4g26080ABI1 (ABA INSENSITIVE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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