Gene omics information

Query gene ID PtpAffx.4462.1.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.4462.1.S1_a_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)S.X.H.G.
0.4471.9PtpAffx.4462.1.S1_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)S.X.H.G.
0.3661.6PtpAffx.77318.1.S1_x_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeS.X.H.G.
0.2340.5PtpAffx.67455.1.S1_atBU874579hypothetical protein-7e-9At1g09970LRR XI-23S.X.H.G.
0.1525.3PtpAffx.24353.1.A1_a_atCV274454hypothetical protein-3e-1At1g26250proline-rich extensin, putativeS.X.H.G.
0.1423.5PtpAffx.224250.1.S1_atpmrna42635hypothetical protein-1e-12At1g01340ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.597.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.196.8GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.996.5GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.996.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.395.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.395.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.195.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.095.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.894.9GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9802196PtpAffx.4462.1.S1_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)C.G.S.X.
0.023e-138PtpAffx.204891.1.S1_atpmrna9661hypothetical protein-4e-1At5g41490F-box family proteinC.G.S.X.
0.011e+036PtpAffx.203982.1.S1_atpmrna7857hypothetical protein-2e-35At1g66250glycosyl hydrolase family 17 proteinC.G.S.X.
0.011e+036PtpAffx.203982.1.S1_s_atpmrna7857hypothetical protein-2e-35At1g66250glycosyl hydrolase family 17 proteinC.G.S.X.
0.011e+036PtpAffx.203612.1.S1_atpmrna7157hypothetical protein-2e-20At5g56360calmodulin-binding proteinC.G.S.X.
0.011e+036PtpAffx.202562.1.S1_s_atpmrna5134hypothetical protein-2e-25At1g66250glycosyl hydrolase family 17 proteinC.G.S.X.
0.011e+036PtpAffx.202562.1.S1_atpmrna5134hypothetical protein-2e-25At1g66250glycosyl hydrolase family 17 proteinC.G.S.X.
0.011e+036PtpAffx.200011.1.S1_atpmrna16hypothetical protein-2e-23At5g56360calmodulin-binding proteinC.G.S.X.
0.014e+034PtpAffx.5583.1.A1_atCV243133--2e-108Atcg00340-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-963Arabidopsis thalianaAt3g57260824893BGL2 (BETA-1,3-GLUCANASE 2)beta 1,3-glucanase---C.G.S.X.
0.071e-656Glycine maxGma.7852.1.S1_atCA819291beta-1,3-glucanase-6e-1At3g24710-C.G.S.X.
0.022e+034Hordeum vulgareEBro08_SQ007_H23_atEBro08_SQ007_H23--8e-1At1g02450NIMIN1 (NIM1-INTERACTING 1)C.G.S.X.
0.034e-448Oryza sativaOs03g06006009631.m03880-Beta-1,3-glucanase precursor5e+0At5g20330BETAG4C.G.S.X.
0.028e-136Triticum aestivumTaAffx.108832.1.S1_atCA683547--9e-1At3g57072unknown proteinC.G.S.X.
0.092e-550Vitis vinifera1615595_atAF239617.2class I beta-1,3-glucanase-3e-3At4g16260catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.035e+032Zea maysZm.6689.1.A1_s_atBM381797hypothetical protein LOC100272379-2e+1At5g55125unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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