Gene omics information

Query gene ID PtpAffx.43592.1.S1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.43592.1.S1_atCV243155--1e-85At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)S.X.H.G.
0.5078.6Ptp.1954.1.S1_atCV274512hypothetical protein-5e-113At5g08300succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeS.X.H.G.
0.4774.6PtpAffx.7845.1.A1_s_atBP932679mitochondrial phosphate carrier protein-3e-23At3g48850mitochondrial phosphate transporter, putativeS.X.H.G.
0.4067.0PtpAffx.249.105.A1_atCV283073hypothetical protein-0At5g08680ATP synthase beta chain, mitochondrial, putativeS.X.H.G.
0.3863.7Ptp.8070.1.A1_atDN492932hypothetical protein-2e-15At4g24330unknown proteinS.X.H.G.
0.3357.5Ptp.2106.1.A1_s_atCK089070mitochondrial phosphate carrier protein-8e-28At5g14040mitochondrial phosphate transporterS.X.H.G.
0.2441.8PtpAffx.23367.1.A1_atCV230093hypothetical protein-8e-15At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)S.X.H.G.
0.2136.5Ptp.1975.1.S1_atCV281968hypothetical protein-2e-31At4g02620vacuolar ATPase subunit F family proteinS.X.H.G.
0.2136.5Ptp.2799.1.S1_atBU874348hypothetical protein-3e-20At5g47890NADH-ubiquinone oxidoreductase B8 subunit, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.797.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
5.697.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
4.596.1GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
3.894.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.389.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.289.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.199e-112404Ptp.2037.1.S1_x_atCV264488hypothetical protein-1e-38At5g0951040S ribosomal protein S15 (RPS15D)C.G.S.X.
0.424e-111402Ptp.2146.1.S1_atCK088192hypothetical protein-5e-109At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.433e-90333PtpAffx.46654.1.S1_atBU889616hypothetical protein-3e-95At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.262e-45184Ptp.4623.1.S1_atBI131888--6e-42At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.163e-28127Ptp.2046.1.A1_atBU836412--7e-27At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.014e-344PtpAffx.208204.1.S1_atpmrna16322hypothetical protein-4e-47At4g14330phragmoplast-associated kinesin-related protein 2 (PAKRP2)C.G.S.X.
0.022e-138PtpAffx.2363.2.A1_s_atCV244561hypothetical protein-2e-65At4g31750WIN2 (HOPW1-1-INTERACTING 2)C.G.S.X.
0.012e-138PtpAffx.206852.1.S1_atpmrna13612hypothetical protein-3e-136At4g31750WIN2 (HOPW1-1-INTERACTING 2)C.G.S.X.
0.022e-138PtpAffx.125362.1.S1_atBU882627hypothetical protein-6e-2At4g3920040S ribosomal protein S25 (RPS25E)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.441e-85317Arabidopsis thalianaAt5g66510836783GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.---C.G.S.X.
0.419e-72272Glycine maxGma.16388.1.S1_atCD403252--1e-42At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.217e-24111Hordeum vulgareContig4878_atContig4878--8e-19At1g47260GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)C.G.S.X.
0.273e-1481Oryza sativaOs07g0642900AK060158.1-Trimeric LpxA-like domain containing protein5e-20At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.184e-24113Triticum aestivumTa.3097.1.S1_atCD937885--2e-7At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
0.451e-110398Vitis vinifera1608449_atCB349956hypothetical protein LOC100247109-6e-72At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.264e-28125Zea maysZm.15626.1.S1_atCA404507--1e-8At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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