Gene omics information

Query gene ID PtpAffx.42238.1.A1_s_at
Gene name lysine/histidine transporter
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0PtpAffx.42238.1.A1_s_atBP933309lysine/histidine transporter-6e-6At1g48640lysine and histidine specific transporter, putativeS.X.H.G.
0.5582.2PtpAffx.152030.1.S1_atCA822109--2e-33At5g40780LHT1S.X.H.G.
0.4369.7PtpAffx.152030.1.S1_s_atCA822109lysine/histidine transporter-2e-33At5g40780LHT1S.X.H.G.
0.3661.6PtpAffx.213838.1.S1_atpmrna27002hypothetical protein-8e-26At4g13630unknown proteinS.X.H.G.
0.2950.5PtpAffx.21874.1.S1_a_atCV235129hypothetical protein-2e-2At5g41210ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)S.X.H.G.
0.2136.5PtpAffx.33230.1.S1_a_atCV246411--2e-96At4g33430BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)S.X.H.G.
0.1219.6PtpAffx.37313.1.A1_atCV256677hypothetical protein-5e-47At3g26020serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.697.2GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.996.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.796.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.293.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.892.1GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5501124PtpAffx.201013.1.S1_atpmrna1989lysine/histidine transporter-1e-21At5g40780LHT1C.G.S.X.
0.192e-34147PtpAffx.201014.1.S1_atpmrna1991lysine/histidine transporter-5e-17At1g67640lysine and histidine specific transporter, putativeC.G.S.X.
0.082e-21103PtpAffx.208626.1.S1_atpmrna17122lysine/histidine transporter-5e-20At5g40780LHT1C.G.S.X.
0.102e-21103PtpAffx.208250.1.S1_atpmrna16421lysine/histidine transporter-1e-14At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.099e-1891PtpAffx.208967.1.S1_s_atpmrna17773lysine/histidine transporter-1e-11At1g25530lysine and histidine specific transporter, putativeC.G.S.X.
0.025e-136PtpAffx.207904.1.S1_atpmrna15689hypothetical protein-2e-31At1g69200kinaseC.G.S.X.
0.022e+034PtpAffx.140462.1.A1_s_atCV253313hypothetical protein-1e-10At5g63270nitrate-responsive NOI protein, putativeC.G.S.X.
0.022e+034PtpAffx.140462.1.A1_atCV253313hypothetical protein-1e-10At5g63270nitrate-responsive NOI protein, putativeC.G.S.X.
0.022e+034PtpAffx.1126.3.A1_atCV244908hypothetical protein-3e-48At1g0836060S ribosomal protein L10A (RPL10aA)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.206e-652Arabidopsis thalianaAt1g48640841286lysine and histidine specific transporter, putativeF:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;PMFOBA---C.G.S.X.
0.352e-53210Glycine maxGmaAffx.42701.1.S1_atBI317008--7e-21At5g40780LHT1C.G.S.X.
0.064e-238Hordeum vulgareHM10P19r_atHM10P19r--1e+0At4g03298unknown proteinC.G.S.X.
0.047e-136Oryza sativaOs12g0244400AK070297.1-Amino acid/polyamine transporter II family protein7e-14At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.154e-136Triticum aestivumTa.4323.1.A1_atBJ264015--5e-15At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
0.103e-857Vitis vinifera1606724_atCF215838hypothetical protein LOC100247480-4e-9At1g25530lysine and histidine specific transporter, putativeC.G.S.X.
0.032e+032Zea maysZm.17174.1.A1_atCO531239hypothetical protein LOC100273979-2e-6At1g24400LHT2 (LYSINE HISTIDINE TRANSPORTER 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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