Gene omics information

Query gene ID PtpAffx.38755.2.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.38755.2.S1_s_atCV252052hypothetical protein-2e-56At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)S.X.H.G.
0.7794.9PtpAffx.1601.13.S1_a_atCV240068hypothetical protein-5e+0At5g44306unknown proteinS.X.H.G.
0.6791.1PtpAffx.5090.1.A1_atCV267261hypothetical protein-1e-1At3g09810isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeS.X.H.G.
0.6086.0PtpAffx.147676.1.A1_atCV230317hypothetical protein-3e-32At4g30600signal recognition particle receptor alpha subunit family proteinS.X.H.G.
0.5683.9PtpAffx.222478.1.S1_atpmrna39929hypothetical protein-1e-48At1g67190F-box family proteinS.X.H.G.
0.3863.7Ptp.4510.1.S1_atCV261413hypothetical protein-1e-8At1g14140mitochondrial substrate carrier family proteinS.X.H.G.
0.3153.7PtpAffx.4085.4.S1_atCV244302hypothetical protein-3e-71At3g59350serine/threonine protein kinase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.499.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
10.299.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
7.398.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.597.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
6.297.6GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.691.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
1.886.4GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
1.886.4GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
1.886.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9001390Ptp.625.1.S1_atCK087324hypothetical protein-4e-60At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.690872Ptp.625.3.S1_atCV277321hypothetical protein-1e-25At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.660700PtpAffx.38755.1.A1_atCV260007hypothetical protein-7e-21At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.191e-26121PtpAffx.181.1.A1_atDN489690--7e+0At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.346e-23109PtpAffx.4827.1.A1_atCV273066--5e+0At3g23570dienelactone hydrolase family proteinC.G.S.X.
0.156e-23109Ptp.4752.1.S1_atCV275199hypothetical protein-5e-60At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.151e-861PtpAffx.6862.1.S1_atDN496244hypothetical protein-7e-24At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.027e-136PtpAffx.7460.1.A1_atAJ780350--3e-23At4g20070ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase)C.G.S.X.
0.013e+034PtpAffx.90122.1.S1_atCK092046--4e-2At1g68620hydrolaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.552e-56220Arabidopsis thalianaAt3g49870824149ATARLA1C (ADP-ribosylation factor-like A1C)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.---C.G.S.X.
0.342e-47190Glycine maxGmaAffx.92317.1.S1_atCF808042--2e-54At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.286e-42171Hordeum vulgareContig9224_atContig9224--1e-38At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.252e-1481Oryza sativaOs02g0732500AK111722.1-ADP-ribosylation factor-like protein2e-58At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.279e-46184Triticum aestivumTa.8631.1.S1_atCA690636--8e-28At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.474e-122436Vitis vinifera1607646_atCB977484hypothetical protein LOC100244584-7e-59At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.202e-756Zea maysZm.7976.1.S1_atBM080696hypothetical protein LOC100217261-2e-46At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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