Gene omics information

Query gene ID PtpAffx.38755.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.38755.1.A1_atCV260007hypothetical protein-7e-21At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)S.X.H.G.
0.6187.0PtpAffx.249.158.S1_a_atCV234195hypothetical protein-9e-23At4g20150unknown proteinS.X.H.G.
0.4067.0Ptp.2022.1.S1_s_atCV258781hypothetical protein-9e-6At5g14240-S.X.H.G.
0.3255.2PtpAffx.59972.2.S1_a_atCX169696hypothetical protein-2e-9At1g48160signal recognition particle 19 kDa protein, putative / SRP19, putativeS.X.H.G.
0.2340.5PtpAffx.88808.1.A1_atCV251825--5e+0At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.2238.3PtpAffx.146199.1.A1_s_atCV272864hypothetical protein-2e-1At2g16860GCIP-interacting family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.996.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.095.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.694.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.670726Ptp.625.1.S1_atCK087324hypothetical protein-4e-60At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.660700PtpAffx.38755.2.S1_s_atCV252052hypothetical protein-2e-56At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.760656Ptp.625.3.S1_atCV277321hypothetical protein-1e-25At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.701e-66254PtpAffx.4827.1.A1_atCV273066--5e+0At3g23570dienelactone hydrolase family proteinC.G.S.X.
0.313e-39163PtpAffx.181.1.A1_atDN489690--7e+0At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.106e-1375Ptp.4752.1.S1_atCV275199hypothetical protein-5e-60At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.173e-859PtpAffx.6862.1.S1_atDN496244hypothetical protein-7e-24At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.025e-136PtpAffx.30187.2.S1_atCX170990hypothetical protein-2e-7At3g48530KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1)C.G.S.X.
0.015e-136PtpAffx.222315.1.S1_atpmrna39641hypothetical protein-7e-40At1g06720-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.397e-21101Arabidopsis thalianaAt3g49870824149ATARLA1C (ADP-ribosylation factor-like A1C)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.---C.G.S.X.
0.434e-26119Glycine maxGmaAffx.92317.1.S1_atCF808042--2e-54At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.214e-27121Hordeum vulgareContig9224_atContig9224--1e-38At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.206e-29129Oryza sativaOs03g0200800AK112007.1--5e-35At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.205e-28125Triticum aestivumTa.8631.1.S1_atCA690636--8e-28At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.418e-89325Vitis vinifera1607646_atCB977484hypothetical protein LOC100244584-7e-59At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.215e-2097Zea maysZm.14791.1.A1_atCF628382ADP-ribosylation factor-like protein 8B-7e-9At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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