Gene omics information

Query gene ID PtpAffx.38736.1.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.38736.1.S1_a_atCF235217hypothetical protein-6e-46At4g34660SH3 domain-containing protein 2 (SH3P2)S.X.H.G.
0.7192.6PtpAffx.132923.1.S1_atDN496162hypothetical protein-1e-38At4g39910ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)S.X.H.G.
0.6791.1Ptp.4292.2.S1_s_atCV283048hypothetical protein-2e-19At3g11530vacuolar protein sorting 55 family protein / VPS55 family proteinS.X.H.G.
0.6791.1PtpAffx.132923.1.S1_s_atDN496162hypothetical protein-1e-38At4g39910ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)S.X.H.G.
0.6791.1PtpAffx.146077.1.S1_atCX177480hypothetical protein-4e-1At2g16890UDP-glucoronosyl/UDP-glucosyl transferase family proteinS.X.H.G.
0.5380.5PtpAffx.63140.2.S1_s_atDN500684hypothetical protein-7e-11At1g43130LCV2 (LIKE COV 2)S.X.H.G.
0.3661.6Ptp.825.2.S1_atBU862707--4e-26At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.797.9GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
5.797.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.393.7GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-654PtpAffx.18064.1.S1_atCV262645hypothetical protein-2e-19At4g18060clathrin bindingC.G.S.X.
0.021e-138PtpAffx.223455.1.S1_atpmrna41476hypothetical protein-4e-15At1g24300-C.G.S.X.
0.015e-136PtpAffx.204892.1.S1_atpmrna9663hypothetical protein-2e-24At5g12430DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.022e+034PtpAffx.8133.2.A1_atCV259144hypothetical protein-6e-17At1g31440SH3 domain-containing protein 1 (SH3P1)C.G.S.X.
0.012e+034PtpAffx.224258.1.S1_atpmrna42653cc-nbs-lrr resistance protein-5e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.012e+034PtpAffx.224274.1.S1_atpmrna42679cc-nbs-lrr resistance protein-2e+0At5g28463unknown proteinC.G.S.X.
0.012e+034PtpAffx.224267.1.S1_atpmrna42671nbs-lrr resistance protein-4e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.012e+034PtpAffx.205399.1.S1_s_atpmrna10691endoplasmic reticulum [ER]-type calcium ATPase-4e-1At4g35295homoserine kinase, putative / HSK, putativeC.G.S.X.
0.012e+034PtpAffx.200681.1.S1_atpmrna1325hypothetical protein-7e-117At2g27210kelch repeat-containing serine/threonine phosphoesterase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.336e-46184Arabidopsis thalianaAt4g34660829618SH3 domain-containing protein 2 (SH3P2)F:clathrin binding;P:biological_process unknown;C:unknown;MOPFB---C.G.S.X.
0.593e-55216Glycine maxGmaAffx.73103.1.S1_atBG725271--3e-20At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.202e-26119Hordeum vulgareContig7332_atContig7332--1e-15At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.149e-1685Oryza sativaOs10g0512700AK067223.1-SH3 domain-containing protein 33e-9At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.173e-2099Triticum aestivumTa.29362.1.S1_a_atBQ901329--1e-9At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.433e-45180Vitis vinifera1612914_atCB343257hypothetical protein LOC100260580-4e-19At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.201e-1479Zea maysZm.16276.1.S1_atBQ164449hypothetical protein LOC100273976-3e-18At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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