CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID PtpAffx.3698.2.S1_at

Gene name hypothetical protein

Organism Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 83.9 PtpAffx.3698.2.S1_at BU894200 hypothetical protein - 1e-82 At1g77610 glucose-6-phosphate/phosphate translocator-related S.X. H.G.
0.59 84.9 PtpAffx.249.708.A1_s_at CV258093 hypothetical protein - 1e+1 Atcg00380 - S.X. H.G.
0.58 84.2 PtpAffx.206961.1.S1_at pmrna13800 hypothetical protein - 5e-59 At1g05960 binding S.X. H.G.
0.47 74.6 PtpAffx.13778.1.S1_a_at CK091687 hypothetical protein - 4e-20 At1g17720 ATB BETA S.X. H.G.
0.46 73.7 PtpAffx.4464.1.S1_a_at CV240296 - - 2e-7 At4g17720 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.46 73.7 PtpAffx.207613.1.S1_at pmrna15098 hypothetical protein - 1e-17 At1g67410 exostosin family protein S.X. H.G.
0.40 67.0 PtpAffx.205381.1.S1_at pmrna10653 hypothetical protein - 8e-23 At3g50050 aspartyl protease family protein S.X. H.G.
0.25 43.6 Ptp.580.1.A1_s_at CK088984 hypothetical protein - 5e+0 At5g62998 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.0 99.5 GSM327412 Populus balsamifera_1006_differentiating_xylem_midday_2 GSE13990 Populus balsamifera developmental tissue series
13.1 99.4 GSM327413 Populus balsamifera_1006_differentiating_xylem_midday_3 GSE13990 Populus balsamifera developmental tissue series
7.8 98.4 GSM327656 Populus balsamifera_Female_Catkin_midday_1 GSE13990 Populus balsamifera developmental tissue series
7.4 98.2 GSM327657 Populus balsamifera_Female_Catkin_midday_2 GSE13990 Populus balsamifera developmental tissue series
6.4 97.7 GSM327658 Populus balsamifera_Female_Catkin_midday_3 GSE13990 Populus balsamifera developmental tissue series
3.8 94.9 GSM327659 Populus balsamifera_Male_Catkin_midday_1 GSE13990 Populus balsamifera developmental tissue series
3.3 93.7 GSM327411 Populus balsamifera_1006_differentiating_xylem_midday_1 GSE13990 Populus balsamifera developmental tissue series
3.0 92.9 GSM327661 Populus balsamifera_Male_Catkin_midday_3 GSE13990 Populus balsamifera developmental tissue series
2.1 88.6 GSM327660 Populus balsamifera_Male_Catkin_midday_2 GSE13990 Populus balsamifera developmental tissue series
2.1 88.6 GSM372097 Clone3200_LPI5_N-_8w_rep1 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.67 0 1394 PtpAffx.3698.1.A1_at CK090457 hypothetical protein - 2e-97 At1g77610 glucose-6-phosphate/phosphate translocator-related C.G. S.X.
0.01 7e-2 40 PtpAffx.2625.2.S1_a_at DN490924 hypothetical protein - 8e-6 At5g16980 NADP-dependent oxidoreductase, putative C.G. S.X.
0.02 7e-2 40 PtpAffx.111679.1.S1_at DN500145 - - 8e-49 At3g13890 ATMYB26 (MYB DOMAIN PROTEIN 26) C.G. S.X.
0.03 3e-1 38 PtpAffx.220836.1.S1_x_at pmrna37282 glutamate-gated kainate-type ion channel receptor subunit GluR5 - 2e-3 At1g51430 unknown protein C.G. S.X.
0.03 3e-1 38 PtpAffx.220836.1.S1_at pmrna37282 glutamate-gated kainate-type ion channel receptor subunit GluR5 - 2e-3 At1g51430 unknown protein C.G. S.X.
0.02 1e+0 36 PtpAffx.75999.1.A1_at CV251974 - - 6e+0 At5g55970 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e+0 36 PtpAffx.69509.1.A1_at CV254759 - - 3e+0 At5g57565 protein kinase family protein C.G. S.X.
0.02 1e+0 36 PtpAffx.3527.2.A1_at DN487040 - - 3e-1 At4g16162 protein binding C.G. S.X.
0.01 1e+0 36 PtpAffx.26161.1.S1_at CV232248 - - 6e-39 At1g27690 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 1e-82 307 Arabidopsis thaliana At1g77610 844096 glucose-6-phosphate/phosphate translocator-related F:organic anion transmembrane transporter activity;P:unknown;C:membrane;PMFOBA - - - C.G. S.X.
0.45 9e-91 335 Glycine max Gma.11244.1.S1_at CD392812 - - 1e-66 At1g21870 glucose-6-phosphate/phosphate translocator-related C.G. S.X.
0.02 1e-1 38 Hordeum vulgare HW08E08u_at HW08E08u - - 7e+0 At1g19840 auxin-responsive family protein C.G. S.X.
0.35 5e-50 200 Oryza sativa Os08g0104900 AK063987.1 - Protein of unknown function DUF6 domain containingprotein 2e-44 At1g77610 glucose-6-phosphate/phosphate translocator-related C.G. S.X.
0.27 1e-15 85 Triticum aestivum Ta.9205.1.S1_at BE517303 - - 2e-14 At1g77610 glucose-6-phosphate/phosphate translocator-related C.G. S.X.
0.37 3e-96 351 Vitis vinifera 1618405_at BQ792473 hypothetical protein LOC100243662 - 4e-23 At1g21870 glucose-6-phosphate/phosphate translocator-related C.G. S.X.
0.24 9e-42 171 Zea mays Zm.872.1.A1_at BG320194 - - 3e-23 At1g77610 glucose-6-phosphate/phosphate translocator-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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