Gene omics information

Query gene ID PtpAffx.3546.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.3546.1.A1_atCV241865hypothetical protein-3e-33At5g10730binding / catalytic/ coenzyme bindingS.X.H.G.
0.6791.1Ptp.2292.1.A1_atCV232695hypothetical protein-4e-125At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)S.X.H.G.
0.6086.0PtpAffx.14532.1.A1_atCK090232hypothetical protein-3e-2At5g64020unknown proteinS.X.H.G.
0.4673.7Ptp.5157.1.S1_a_atCF230150hypothetical protein-1e-13At4g17720RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.3559.7PtpAffx.121639.1.A1_s_atCK087677hypothetical protein-4e+0At1g65484unknown proteinS.X.H.G.
0.2747.1PtpAffx.108502.1.A1_x_atBI127008hypothetical protein-8e-30At3g48030hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.499.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
14.399.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
13.299.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
12.999.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
12.299.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.785.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.178.0GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
1.076.2GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
0.974.2GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
0.974.2GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.467e-134478PtpAffx.108360.1.A1_atCV243515hypothetical protein-4e-6At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.335e-73276PtpAffx.206853.1.S1_x_atpmrna13617hypothetical protein-2e-4At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.335e-73276PtpAffx.206853.1.S1_atpmrna13617hypothetical protein-2e-4At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.168e-35149PtpAffx.217594.1.S1_atpmrna32926hypothetical protein-1e-1At1g23420INO (INNER NO OUTER)C.G.S.X.
0.143e-31137PtpAffx.85663.1.S1_atCK095734hypothetical protein-4e-24At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.022e-138PtpAffx.223098.1.S1_atpmrna40917hypothetical protein-3e+0At5g57410unknown proteinC.G.S.X.
0.022e-138PtpAffx.222548.1.S1_s_atpmrna40061hypothetical protein-3e+0At5g04386unknown proteinC.G.S.X.
0.022e-138PtpAffx.222548.1.S1_atpmrna40061hypothetical protein-3e+0At5g04386unknown proteinC.G.S.X.
0.022e-138PtpAffx.211856.1.S1_atpmrna23271hypothetical protein-6e-7At2g31690lipase class 3 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.313e-33143Arabidopsis thalianaAt5g10730830939binding / catalytic/ coenzyme bindingF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:plasma membrane;BOFPMA---C.G.S.X.
0.452e-50200Glycine maxGma.5240.1.S1_a_atBI320490--3e-42At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.093e-446Hordeum vulgareContig5386_atContig5386--3e-3At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.088e-550Oryza sativaOs02g0556100AK103125.1-Conserved hypothetical protein3e-3At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.022e-138Triticum aestivumTa.10980.1.A1_atBQ166949--4e+0At4g23570SGT1AC.G.S.X.
0.521e-107389Vitis vinifera1612243_atCA809708--2e-44At5g10730binding / catalytic/ coenzyme bindingC.G.S.X.
0.023e-136Zea maysZm.14497.12.A1_atCA404826hypothetical protein LOC100192792-6e-22At1g07790HTB1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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