Gene omics information

Query gene ID PtpAffx.33074.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.33074.1.S1_atCK091989hypothetical protein-6e-65At5g42000ORMDL family proteinS.X.H.G.
0.5884.2PtpAffx.18236.1.S1_atCV272788hypothetical protein-1e-10At1g09645unknown proteinS.X.H.G.
0.5784.2PtpAffx.206496.1.S1_atpmrna12888hypothetical protein-5e-33At4g02050sugar transporter, putativeS.X.H.G.
0.5078.6PtpAffx.3546.1.A1_atCV241865hypothetical protein-3e-33At5g10730binding / catalytic/ coenzyme bindingS.X.H.G.
0.4875.4PtpAffx.223426.1.S1_atpmrna41429mitochondrial phosphate carrier protein-2e-74At5g14040mitochondrial phosphate transporterS.X.H.G.
0.4774.6PtpAffx.17728.1.S1_s_atCV275037hypothetical protein-4e-20At1g74320choline kinase, putativeS.X.H.G.
0.4369.7PtpAffx.150892.1.S1_atAJ776439hypothetical protein-3e-79At4g00720ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)S.X.H.G.
0.3863.7Ptp.2292.1.A1_s_atCV232695hypothetical protein-4e-125At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)S.X.H.G.
0.2747.1PtpAffx.121639.1.A1_s_atCK087677hypothetical protein-4e+0At1g65484unknown proteinS.X.H.G.
0.2238.3PtpAffx.207061.1.S1_s_atpmrna13997hypothetical protein-3e-109At5g64030dehydration-responsive protein-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.599.7GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
13.599.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
13.299.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
12.399.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
5.597.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.987.2GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.482.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
1.279.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.178.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
1.076.2GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.670809Ptp.4464.1.S1_atBU816494hypothetical protein-2e-34At5g42000ORMDL family proteinC.G.S.X.
0.402e-65250PtpAffx.91753.1.S1_atCV255588hypothetical protein-1e-22At1g01230ORMDL family proteinC.G.S.X.
0.112e-1687Ptp.75.2.S1_atBI126224hypothetical protein-1e-4At5g42000ORMDL family proteinC.G.S.X.
0.021e-242PtpAffx.225606.1.S1_atpmrna45065hypothetical protein-7e-10At5g60020LAC17 (laccase 17)C.G.S.X.
0.021e-242PtpAffx.224171.1.S1_s_atpmrna42454--3e-12At5g60020LAC17 (laccase 17)C.G.S.X.
0.022e-138PtpAffx.209677.1.S1_atpmrna19103hypothetical protein-6e-1At4g07825unknown proteinC.G.S.X.
0.006e-136PtpAffx.225672.1.S1_x_atpmrna45191hypothetical protein-0At2g17930binding / inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptorC.G.S.X.
0.006e-136PtpAffx.225672.1.S1_s_atpmrna45191hypothetical protein-0At2g17930binding / inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptorC.G.S.X.
0.016e-136PtpAffx.214409.1.S1_atpmrna28031glutamate-gated kainate-type ion channel receptor subunit GluR5-2e-2At5g11210ATGLR2.5C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.516e-65248Arabidopsis thalianaAt5g42000834205ORMDL family proteinF:molecular_function unknown;P:protein folding;C:integral to membrane, endoplasmic reticulum;MFPO---C.G.S.X.
0.371e-73278Glycine maxGma.4991.1.S1_atCD401320--3e-30At1g01230ORMDL family proteinC.G.S.X.
0.242e-41169Hordeum vulgareContig7391_atContig7391--2e-25At5g42000ORMDL family proteinC.G.S.X.
0.243e-47190Oryza sativaOs04g0567700AK064998.1-ORMDL family protein3e-24At5g42000ORMDL family proteinC.G.S.X.
0.171e-35151Triticum aestivumTa.13670.1.S1_atBQ752884--3e-18At5g42000ORMDL family proteinC.G.S.X.
0.334e-48190Vitis vinifera1614352_atCD801544hypothetical protein LOC100244495-2e-15At5g42000ORMDL family proteinC.G.S.X.
0.222e-26119Zea maysZm.7372.1.A1_x_atBM379583hypothetical protein LOC100274524-2e-17At5g42000ORMDL family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage