Gene omics information

Query gene ID PtpAffx.32281.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.32281.1.A1_atCV225439hypothetical protein-2e-8At1g67530armadillo/beta-catenin repeat family protein / U-box domain-containing family proteinS.X.H.G.
0.5078.6Ptp.860.1.S1_s_atCX659955hypothetical protein-7e-16At5g11090serine-rich protein-relatedS.X.H.G.
0.4067.0Ptp.6305.2.A1_atDN484232hypothetical protein-2e-8At1g55840SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer proteinS.X.H.G.
0.2543.6PtpAffx.29939.1.A1_atCV275765hypothetical protein-7e-1At1g53625unknown proteinS.X.H.G.
0.2340.5PtpAffx.21461.1.S1_atDN488118NAC domain protein, IPR003441-2e-3At1g25580ANAC008 (Arabidopsis NAC domain containing protein 8)S.X.H.G.
0.1321.6PtpAffx.9780.1.A1_atDN490439hypothetical protein-1e+0At3g53490unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.298.8GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.688e-117420Ptp.3461.1.S1_s_atBU896604hypothetical protein-5e-7At1g24330armadillo/beta-catenin repeat family protein / U-box domain-containing family proteinC.G.S.X.
0.021e-138PtpAffx.215580.1.S1_atpmrna29857hypothetical protein-7e-69At3g54190-C.G.S.X.
0.041e-138PtpAffx.210063.1.S1_atpmrna19821cytochrome P450-2e-1At1g15270-C.G.S.X.
0.041e-138PtpAffx.210063.1.S1_x_atpmrna19821cytochrome P450-2e-1At1g15270-C.G.S.X.
0.005e-136PtpAffx.222227.1.S1_atpmrna39502hypothetical protein-5e-29At1g67120ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / transcription factor bindingC.G.S.X.
0.025e-136PtpAffx.206035.1.S1_atpmrna11957hypothetical protein-6e-14At2g40850phosphatidylinositol 3- and 4-kinase family proteinC.G.S.X.
0.042e+034PtpAffx.52061.1.S1_atCK089686--5e+0At3g01319unknown proteinC.G.S.X.
0.022e+034PtpAffx.249.134.S1_s_atCV261075hypothetical protein-1e-17At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)C.G.S.X.
0.012e+034PtpAffx.214374.1.S1_atpmrna27972hypothetical protein-5e-28At2g18900transducin family protein / WD-40 repeat family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-859Arabidopsis thalianaAt1g67530843074armadillo/beta-catenin repeat family protein / U-box domain-containing family proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBV---C.G.S.X.
0.171e-448Glycine maxGma.6865.1.S1_atBI971010--3e-1At4g24275-C.G.S.X.
0.023e+032Hordeum vulgareContig18786_atContig18786--1e+0At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)C.G.S.X.
0.033e+034Oryza sativaOsAffx.27439.1.S1_at---0C.G.S.X.
0.035e+032Triticum aestivumTaAffx.66055.1.S1_atBJ210143--2e+0At1g80700unknown proteinC.G.S.X.
0.034e-134Vitis vinifera1609261_s_atCB982050hypothetical protein LOC100264228-4e+0At2g26020PDF1.2b (plant defensin 1.2b)C.G.S.X.
0.031e-136Zea maysZm.9086.1.A1_atAI649547hypothetical protein LOC100280062-7e-2At1g08160harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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