Gene omics information

Query gene ID PtpAffx.3181.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7594.1PtpAffx.3181.1.S1_atCV260015hypothetical protein-2e-16At3g14150(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeS.X.H.G.
0.6187.0PtpAffx.209318.1.S1_atpmrna18412hypothetical protein-5e-35At2g39830DAR2 (DA1-RELATED PROTEIN 2)S.X.H.G.
0.4067.0PtpAffx.3955.2.S1_atBU881273hypothetical protein-2e-2At3g54240hydrolase, alpha/beta fold family proteinS.X.H.G.
0.2747.1PtpAffx.151315.1.S1_atBU881641hypothetical protein-6e-9At2g48020sugar transporter, putativeS.X.H.G.
0.2747.1PtpAffx.29266.2.A1_a_atCV260961hypothetical protein-3e-5At1g74280hydrolase, alpha/beta fold family proteinS.X.H.G.
0.2034.6PtpAffx.30743.1.A1_atCV268894hypothetical protein-4e-1At3g22110PAC1S.X.H.G.
0.1626.9PtpAffx.217581.1.S1_s_atpmrna32910hypothetical protein-4e-8At5g57630CIPK21 (CBL-interacting protein kinase 21)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.398.2GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
6.797.9GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
6.197.6GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.796.3GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.596.1GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.995.1GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.794.7GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.193.2GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-1273PtpAffx.46728.1.S1_atCV279430hypothetical protein-7e-100At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.019e-136PtpAffx.224182.1.S1_atpmrna42482hypothetical protein-5e-8At1g78270AtUGT85A4 (UDP-glucosyl transferase 85A4)C.G.S.X.
0.019e-136PtpAffx.213278.1.S1_atpmrna25970--2e-10At2g41500EMB2776C.G.S.X.
0.029e-136PtpAffx.201640.1.S1_atpmrna3255hypothetical protein-1e-5At2g18190AAA-type ATPase family proteinC.G.S.X.
0.029e-136Ptp.1148.1.S1_atCK100484hypothetical protein-2e+0At1g22380AtUGT85A3 (UDP-glucosyl transferase 85A3)C.G.S.X.
0.029e-136Ptp.1148.1.S1_s_atCK100484hypothetical protein-2e+0At1g22380AtUGT85A3 (UDP-glucosyl transferase 85A3)C.G.S.X.
0.024e+034PtpAffx.249.420.A1_atCV262823--2e+0At2g17560HMGB4 (HIGH MOBILITY GROUP B 4)C.G.S.X.
0.014e+034PtpAffx.249.206.A1_atCV254671--5e-1At5g18030auxin-responsive protein, putativeC.G.S.X.
0.014e+034PtpAffx.224527.1.S1_atpmrna43146hypothetical protein-3e-6At4g21065-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.172e-1687Arabidopsis thalianaAt3g14150820632(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity, electron carrier activity, oxidoreductase activity, FMN binding, catalytic activity;P:metabolic process;C:unknown;OBFMPA---C.G.S.X.
0.044e-344Glycine maxGma.7309.1.S1_atCD396548peroxisomal glycolate oxidase-1e-113At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.021e-654Hordeum vulgareContig8976_atContig8976--1e-20At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.062e-242Oryza sativaOs04g0623500AK068638.1-(S)-2-hydroxy-acid oxidase, peroxisomal (EC1.1.3.15) (Glycolate oxidase) (GOX) (Short chainalpha-hydroxy acid oxidase)7e-29At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.022e-448Triticum aestivumTa.10548.1.S1_atCD908152--5e-5At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.262e-41169Vitis vinifera1609301_atCD800682hypothetical protein LOC100253231-4e+0At3g14150(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.083e-756Zea maysZm.2298.2.A1_atBQ619139hypothetical protein LOC100192687-1e-21At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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