Gene omics information

Query gene ID PtpAffx.31782.2.A1_a_at
Gene name gtp-binding protein SAR1
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0PtpAffx.31782.2.A1_a_atCV272415gtp-binding protein SAR1-4e-47At1g09180ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)S.X.H.G.
0.5078.6PtpAffx.5219.1.A1_s_atCN523722hypothetical protein-5e-13At4g29220PFK1 (PHOSPHOFRUCTOKINASE 1)S.X.H.G.
0.5078.6Ptp.3127.1.S1_s_atAJ777838hypothetical protein-3e-52At4g26270PFK3 (PHOSPHOFRUCTOKINASE 3)S.X.H.G.
0.3863.7PtpAffx.85773.1.S1_atCK107579white-brown-complex ABC transporter family-6e-17At1g53390ATPase, coupled to transmembrane movement of substancesS.X.H.G.
0.3863.7PtpAffx.132883.1.S1_atBI072375hypothetical protein-2e-1At4g10430-S.X.H.G.
0.3559.7PtpAffx.207242.1.S1_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.399.4GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
12.599.3GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
9.498.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
6.197.6GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.197.6GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.289.3GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.670702Ptp.3963.1.S1_atDN488508gtp-binding protein SAR1-5e-50At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)C.G.S.X.
0.560672Ptp.3880.1.S1_atCK091903hypothetical protein-9e-80At1g56330ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)C.G.S.X.
0.600660PtpAffx.39678.1.S1_atCX172487hypothetical protein-3e-76At1g56330ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)C.G.S.X.
0.321e-93343PtpAffx.215714.1.S1_atpmrna30066hypothetical protein-7e-55At1g56330ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)C.G.S.X.
0.542e-92339Ptp.5570.1.S1_atCV261857hypothetical protein-5e-47At3g62560GTP-binding protein, putativeC.G.S.X.
0.495e-81301PtpAffx.56113.1.A1_atCV277642--4e-1At1g09180ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)C.G.S.X.
0.512e-68260PtpAffx.5383.1.S1_atCV251335gtp-binding protein SAR1-1e-44At3g62560GTP-binding protein, putativeC.G.S.X.
0.072e-344PtpAffx.209041.1.S1_atpmrna17898--5e-8At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)C.G.S.X.
0.048e-342PtpAffx.41770.1.S1_atCV244088hypothetical protein-3e-67At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.574e-47188Arabidopsis thalianaAt1g09180837438ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.---C.G.S.X.
0.551e-78293Glycine maxGma.6113.1.S1_atAW310349--3e-30At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)C.G.S.X.
0.418e-56216Hordeum vulgareContig3844_atContig3844--5e-47At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)C.G.S.X.
0.513e-31137Oryza sativaOs12g0560300AK060332.1-NTGB2 (Fragment)5e-44At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)C.G.S.X.
0.358e-24111Triticum aestivumTa.7164.1.S1_atBJ229457--8e-68At3g62560GTP-binding protein, putativeC.G.S.X.
0.481e-71268Vitis vinifera1611184_atBQ797235hypothetical protein LOC100248702-6e-59At1g56330ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)C.G.S.X.
0.473e-43174Zea maysZm.14470.1.S1_atCA400454--8e-28At3g62560GTP-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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