Gene omics information

Query gene ID PtpAffx.30368.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)S.X.H.G.
0.5078.6PtpAffx.14629.1.S1_atDN496142f-box family protein /// f-box family protein-2e-1At2g02870kelch repeat-containing F-box family proteinS.X.H.G.
0.4673.7PtpAffx.7528.1.S1_atCV270873hypothetical protein-6e-10At4g35980unknown proteinS.X.H.G.
0.4471.9Ptp.7060.1.A1_x_atCV262139hypothetical protein-9e-27At1g23290RPL27ABS.X.H.G.
0.4471.9Ptp.5696.1.S1_s_atCV240717hypothetical protein-5e-41At2g19830SNF7.2S.X.H.G.
0.2136.5PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.092.9GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.691.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.590.9GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.289.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.188.6GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.188.6GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.610728Ptp.6507.1.S1_atCV264970--2e-3At3g51730saposin B domain-containing proteinC.G.S.X.
0.576e-168591PtpAffx.30368.2.S1_atCX657356hypothetical protein-2e-3At3g51730saposin B domain-containing proteinC.G.S.X.
0.576e-168591PtpAffx.30368.2.S1_s_atCX657356hypothetical protein-2e-3At3g51730saposin B domain-containing proteinC.G.S.X.
0.025e-240PtpAffx.141320.1.S1_atAJ769300hypothetical protein-1e-136At3g03940protein kinase family proteinC.G.S.X.
0.022e-138Ptp.3603.1.S1_atDN492804--8e-3At1g62830LDL1 (LSD1-LIKE1)C.G.S.X.
0.027e-136PtpAffx.3093.1.S1_atCV246819hypothetical protein-1e-4At4g03965protein binding / zinc ion bindingC.G.S.X.
0.027e-136Ptp.1622.1.A1_s_atCK092265hypothetical protein-8e-1At2g04910glycosyl hydrolase family protein 17C.G.S.X.
0.023e+034PtpAffx.33735.1.S1_s_atBU824045hypothetical protein-2e-18At5g25110CIPK25 (CBL-INTERACTING PROTEIN KINASE 25)C.G.S.X.
0.013e+034PtpAffx.225872.1.S1_atpmrna45514cc-nbs-lrr resistance protein-4e-1At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Arabidopsis thalianaAt1g76180843950ERD14 (EARLY RESPONSE TO DEHYDRATION 14)Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.---C.G.S.X.
0.035e-240Glycine maxHgAffx.11289.1.S1_atCB935161--1e+0At3g03500tatD-related deoxyribonuclease family proteinC.G.S.X.
0.021e+034Hordeum vulgareHU08A18u_atHU08A18u--4e+0At5g46560unknown proteinC.G.S.X.
0.024e+034Oryza sativaOsAffx.823.1.S1_at---0C.G.S.X.
0.022e+034Triticum aestivumTaAffx.133323.1.S1_atBJ235784--3e-1At5g42655-C.G.S.X.
0.081e-859Vitis vinifera1619344_s_atCB968636hypothetical protein LOC100248250-2e+0At3g51730saposin B domain-containing proteinC.G.S.X.
0.024e+032Zea maysZm.9159.1.A1_atBM340817--4e-1At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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