Gene omics information

Query gene ID PtpAffx.3033.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2PtpAffx.3033.1.S1_atCK101033hypothetical protein-1e-26At1g43690ubiquitin interaction motif-containing proteinS.X.H.G.
0.4774.6PtpAffx.204145.1.S1_s_atpmrna8170hypothetical protein-5e-97At3g01300protein kinase, putativeS.X.H.G.
0.4067.0PtpAffx.201356.1.S1_s_atpmrna2691hypothetical protein-8e-9At3g14750unknown proteinS.X.H.G.
0.3052.0PtpAffx.205235.1.S1_atpmrna10377hypothetical protein-1e-8At5g23340-S.X.H.G.
0.2950.5PtpAffx.133206.1.S1_s_atBU875939hypothetical protein-4e-19At1g71080unknown proteinS.X.H.G.
0.2747.1Ptp.3821.1.S1_s_atCV245704hypothetical protein-7e-9At3g51610unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.095.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-344PtpAffx.209729.1.S1_atpmrna19206hypothetical protein-1e-13At4g21430B160C.G.S.X.
0.016e-240PtpAffx.202740.1.S1_atpmrna5471hypothetical protein-1e-5At5g46040proton-dependent oligopeptide transport (POT) family proteinC.G.S.X.
0.026e-240PtpAffx.200322.1.S1_atpmrna641hypothetical protein-6e-1At5g50915basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.012e-138PtpAffx.213931.1.S1_atpmrna27161hypothetical protein-6e-11At5g39785structural constituent of ribosomeC.G.S.X.
0.012e-138PtpAffx.207443.1.S1_atpmrna14782hypothetical protein-2e-4At5g67570DG1 (DELAYED GREENING 1)C.G.S.X.
0.011e+036PtpAffx.218292.1.S1_s_atpmrna33851hypothetical protein-8e-2At1g20132hydrolase, acting on ester bonds / lipaseC.G.S.X.
0.011e+036PtpAffx.11742.1.A1_atCV254453hypothetical protein-1e-17At5g25160ZFP3 (ZINC FINGER PROTEIN 3)C.G.S.X.
0.024e+034PtpAffx.4395.4.A1_atCX182030hypothetical protein-2e-5At2g43970La domain-containing proteinC.G.S.X.
0.024e+034PtpAffx.21447.2.A1_a_atCK095748hypothetical protein-4e-1At3g46540epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.161e-26121Arabidopsis thalianaAt1g43690840956ubiquitin interaction motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP---C.G.S.X.
0.125e-24113Glycine maxGmaAffx.69794.1.S1_atBU091011--1e-11At1g43690ubiquitin interaction motif-containing proteinC.G.S.X.
0.026e-342Hordeum vulgareContig5897_atContig5897--6e-1At5g27810sequence-specific DNA binding / transcription factorC.G.S.X.
0.049e-550Oryza sativaOs04g0421800AK068951.1-EF-Hand-like domain containing protein3e-3At1g43690ubiquitin interaction motif-containing proteinC.G.S.X.
0.037e-136Triticum aestivumTa.21273.1.S1_s_atCA615208--4e-1At2g42460meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.023e+032Vitis vinifera1608595_atCF413802--1e+0At4g04580myb family transcription factorC.G.S.X.
0.021e+034Zea maysZm.3817.1.S1_atBG841104--1e-6At5g63970copine-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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