Gene omics information

Query gene ID PtpAffx.283.1.A1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.283.1.A1_x_atCV226943hypothetical protein-5e-96At5g20830SUS1 (SUCROSE SYNTHASE 1)S.X.H.G.
0.8397.0PtpAffx.283.14.A1_x_atCV272972hypothetical protein-2e-34At5g20830SUS1 (SUCROSE SYNTHASE 1)S.X.H.G.
0.8096.0Ptp.3758.1.S1_atCV251606hypothetical protein-2e-11At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)S.X.H.G.
0.7794.9Ptp.1701.1.S1_s_atCK093047glycosyltransferase, CAZy family GT8-1e-8At3g50760GATL2 (Galacturonosyltransferase-like 2)S.X.H.G.
0.6187.0Ptp.2441.1.S1_x_atCV225767hypothetical protein-2e-38At3g59480pfkB-type carbohydrate kinase family proteinS.X.H.G.
0.6086.0Ptp.5810.1.S1_s_atCF232478hypothetical protein-7e-37At1g23480ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.299.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
15.599.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
12.399.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
5.396.9GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.992.5GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.3501067PtpAffx.283.14.A1_x_atCV272972hypothetical protein-2e-34At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.300718PtpAffx.283.4.A1_x_atCF229236--6e-3At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.263e-169597PtpAffx.283.2.A1_x_atCV227694--5e-3At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.211e-155551PtpAffx.283.5.A1_x_atCV270031--9e-1At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.105e-32141PtpAffx.23657.1.S1_s_atBP928698hypothetical protein-6e-42At5g49190SUS2 (SUCROSE SYNTHASE 2)C.G.S.X.
0.111e-23113PtpAffx.208465.1.S1_atpmrna16817hypothetical protein-6e-38At5g49190SUS2 (SUCROSE SYNTHASE 2)C.G.S.X.
0.054e-20101PtpAffx.283.16.S1_s_atCV226238hypothetical protein-6e-65At5g25265unknown proteinC.G.S.X.
0.054e-20101PtpAffx.283.16.S1_atCV226238--6e-65At5g25265unknown proteinC.G.S.X.
0.112e-1999Ptp.1552.1.S1_x_atDN487944hypothetical protein-9e-29At4g02280SUS3 (sucrose synthase 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.445e-96353Arabidopsis thalianaAt5g20830832206SUS1 (SUCROSE SYNTHASE 1)Encodes a protein with sucrose synthase activity (SUS1).---C.G.S.X.
0.544e-122440Glycine maxGma.1828.1.S1_atAF030231.1sucrose synthase-3e-60At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.262e-32141Hordeum vulgareContig460_s_atContig460sucrose synthase-6e-12At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.253e-46188Oryza sativaOs06g0194900AK119193.1-Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDPglucosyltransferase 1)3e-60At5g20830SUS1 (SUCROSE SYNTHASE 1)C.G.S.X.
0.218e-24113Triticum aestivumTa.92.1.S1_s_atCD869165sucrose synthase type I-1e-22At3g43190SUS4C.G.S.X.
0.524e-180630Vitis vinifera1619223_s_atCB005867hypothetical protein LOC100249279-3e-41At3g43190SUS4C.G.S.X.
0.203e-1893Zea maysZm.3550.1.A1_atCF624216sucrose synthase1-8e-12At3g43190SUS4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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