Gene omics information

Query gene ID PtpAffx.27553.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.27553.1.S1_atDN501136hypothetical protein-1e+0At2g04800unknown proteinS.X.H.G.
0.2034.6PtpAffx.202202.1.S1_x_atpmrna4400hypothetical protein-1e+0At5g44920Toll-Interleukin-Resistance (TIR) domain-containing proteinS.X.H.G.
0.1525.3PtpAffx.225165.1.S1_atpmrna44309hypothetical protein-6e-37At5g24080protein kinase family proteinS.X.H.G.
0.058.3PtpAffx.3645.1.S1_atBP934882catalase-0At4g35090CAT2 (CATALASE 2)S.X.H.G.
0.046.9PtpAffx.208770.1.S1_s_atpmrna17383hypothetical protein-6e-1At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.035.2Ptp.3180.1.S1_x_atCV256657hypothetical protein-3e-15At1g35720ANNAT1 (ANNEXIN ARABIDOPSIS 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.799.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
17.599.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
15.699.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.697.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
1.684.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.684.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-344PtpAffx.75081.1.S1_atCN520063hypothetical protein-9e-2At2g24550unknown proteinC.G.S.X.
0.011e-138PtpAffx.200356.1.S1_atpmrna714hypothetical protein-1e-21At5g10560glycosyl hydrolase family 3 proteinC.G.S.X.
0.015e-136PtpAffx.224505.1.S1_atpmrna43100hypothetical protein-3e-7At5g64320pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.035e-136PtpAffx.221456.1.S1_atpmrna38352hypothetical protein-1e+0At1g57610unknown proteinC.G.S.X.
0.025e-136Ptp.963.1.A1_s_atCV270935hypothetical protein-3e-5At2g20520FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)C.G.S.X.
0.015e-136Ptp.4403.1.S1_atDN489188tubulin gamma complex-associated protein-1e-73At5g17410tubulin family proteinC.G.S.X.
0.022e+034PtpAffx.93077.1.S1_s_atDN499755hypothetical protein-6e-9At2g03670CDC48BC.G.S.X.
0.022e+034PtpAffx.93077.1.S1_atDN499755--6e-9At2g03670CDC48BC.G.S.X.
0.022e+034PtpAffx.36802.1.S1_atBP936440hypothetical protein-2e-44At3g17000UBC32 (ubiquitin-conjugating enzyme 32)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt2g04800815024unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P---C.G.S.X.
0.048e-342Glycine maxGmaAffx.4831.1.S1_atBI941763--1e-2At2g14660unknown proteinC.G.S.X.
0.033e+032Hordeum vulgareHVSMEc0006F02r2_atHVSMEc0006F02r2--4e+0At2g34655unknown proteinC.G.S.X.
0.047e-136Oryza sativaOs04g0668400AK107558.1-Conserved hypothetical protein1e+0At5g15690-C.G.S.X.
0.041e+034Triticum aestivumTa.12429.1.S1_s_atCA646467--5e-1At4g18870heat shock transcription factor family proteinC.G.S.X.
0.032e+032Vitis vinifera1613918_atCB345600hypothetical protein LOC100252364-4e-6At1g01630SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.026e-134Zea maysZm.1585.1.S1_atCO519290profilin 2-6e-16At4g29340PRF4 (PROFILIN 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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