Gene omics information

Query gene ID PtpAffx.26534.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.26534.1.S1_atCK095200hypothetical protein-6e-10At4g39670glycolipid binding / glycolipid transporterS.X.H.G.
0.5078.6Ptp.5844.1.S1_s_atCX169943hypothetical protein-1e-99At3g46440UXS5S.X.H.G.
0.4471.9PtpAffx.83113.2.S1_a_atDN500467hypothetical protein-1e-12At2g46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinS.X.H.G.
0.3153.7PtpAffx.36788.2.S1_atCK106901hypothetical protein-1e-6At4g36450ATMPK14 (Mitogen-activated protein kinase 14)S.X.H.G.
0.2034.6Ptp.6495.1.S1_s_atBU897639hypothetical protein-9e-17At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeS.X.H.G.
0.1321.6Ptp.4502.1.S1_atCN523586hypothetical protein-7e-53At2g44350ATCSS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.899.4GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
11.999.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
9.898.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
7.998.4GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
6.697.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.696.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.892.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.590.9GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.254e-27123PtpAffx.208957.1.S1_atpmrna17751hypothetical protein-2e+0At1g48330unknown proteinC.G.S.X.
0.015e-240PtpAffx.224518.1.S1_atpmrna43137hypothetical protein-6e-2At1g52190proton-dependent oligopeptide transport (POT) family proteinC.G.S.X.
0.023e+034PtpAffx.93133.1.S1_atDN497069--5e-10At1g61240unknown proteinC.G.S.X.
0.023e+034PtpAffx.93133.1.S1_s_atDN497069hypothetical protein-5e-10At1g61240unknown proteinC.G.S.X.
0.013e+034PtpAffx.221508.1.S1_atpmrna38427multidrug resistance protein ABC transporter family-7e-34At3g21250ATMRP6C.G.S.X.
0.013e+034PtpAffx.211851.1.S1_atpmrna23255hypothetical protein-1e-54At3g23670KINESIN-12BC.G.S.X.
0.013e+034PtpAffx.208337.1.S1_atpmrna16573chromatin remodeling complex subunit-9e-1At5g61440ACHT5 (ATYPICAL CYS HIS RICH THIOREDOXIN 5)C.G.S.X.
0.013e+034PtpAffx.207269.1.S1_atpmrna14422glutamate-gated kainate-type ion channel receptor subunit GluR5-7e-2At2g27470NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)C.G.S.X.
0.013e+034Ptp.5612.1.S1_atCV227178hypothetical protein-2e-25At5g32450RNA recognition motif (RRM)-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.136e-1065Arabidopsis thalianaAt4g39670830121glycolipid binding / glycolipid transporterF:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:cytoplasm;MPOF---C.G.S.X.
0.023e+034Glycine maxGmaAffx.34532.1.S1_atBG362816--1e+0At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)C.G.S.X.
0.024e+032Hordeum vulgareHK05M14r_atHK05M14r--6e+0At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)C.G.S.X.
0.023e-138Oryza sativaOs.56990.1.S1_at---0C.G.S.X.
0.026e-136Triticum aestivumTaAffx.13263.1.S1_atCA688411--6e-2At2g01340unknown proteinC.G.S.X.
0.204e-36151Vitis vinifera1621932_atCA808137hypothetical protein LOC100256114-4e-3At2g34690ACD11 (ACCELERATED CELL DEATH 11)C.G.S.X.
0.021e-344Zea maysZm.7920.1.S1_atBQ619130hypothetical protein LOC100273327-7e+0At4g27470zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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