Gene omics information

Query gene ID PtpAffx.249.532.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5279.4PtpAffx.249.532.A1_atCV240888hypothetical protein-8e-2At2g42190unknown proteinS.X.H.G.
0.8096.0PtpAffx.454.23.A1_atCV263584hypothetical protein-2e-12At3g44150unknown proteinS.X.H.G.
0.6791.1PtpAffx.7994.1.S1_atCV263629hypothetical protein-4e-2At2g45530zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6791.1PtpAffx.3985.1.S1_atCV264450hypothetical protein-5e-26At2g33120SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)S.X.H.G.
0.6388.1PtpAffx.20990.1.S1_s_atCV255803hypothetical protein-5e-42At3g11910UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13)S.X.H.G.
0.5784.2PtpAffx.44424.1.A1_s_atCX176243--2e+0At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4875.4Ptp.1507.1.S1_s_atCV234381hypothetical protein-0At5g46630clathrin adaptor complexes medium subunit family proteinS.X.H.G.
0.4673.7Ptp.4620.1.S1_s_atBI131414hypothetical protein-8e-27At3g13772endomembrane protein 70, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.998.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
7.798.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
6.998.0GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.490.4GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
1.987.2GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.987.2GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
1.987.2GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6801029PtpAffx.249.116.A1_a_atCV263735hypothetical protein-1e-1At2g42190unknown proteinC.G.S.X.
0.640747PtpAffx.249.199.A1_atCV259175hypothetical protein-3e-2At4g26110NAP1C.G.S.X.
0.417e-151533PtpAffx.249.782.S1_a_atCV268722hypothetical protein-4e-32At1g56340CRT1 (CALRETICULIN 1)C.G.S.X.
0.035e-136PtpAffx.86908.1.S1_atDN494910hypothetical protein-1e+0At5g28610-C.G.S.X.
0.015e-136PtpAffx.223438.1.S1_atpmrna41448hypothetical protein-2e-17At2g33490hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.035e-136PtpAffx.202363.1.S1_atpmrna4741hypothetical protein-4e-3At4g02170unknown proteinC.G.S.X.
0.025e-136Ptp.2999.1.S1_atDN485943SAUR family protein-7e-3At2g46690auxin-responsive family proteinC.G.S.X.
0.022e+034PtpAffx.68627.1.S1_atCV255308hypothetical protein-5e-45At1g53290galactosyltransferase family proteinC.G.S.X.
0.022e+034PtpAffx.44331.1.A1_a_atCV279604--2e+0At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.128e-238Arabidopsis thalianaAt2g42190818819unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA---C.G.S.X.
0.151e-138Glycine maxGmaAffx.77698.2.S1_atBM525939--9e-1At2g17240unknown proteinC.G.S.X.
0.032e-136Hordeum vulgareContig18288_s_atContig18288--1e+0At1g73325trypsin and protease inhibitor family protein / Kunitz family proteinC.G.S.X.
0.042e-138Oryza sativaOs02g07172009630.m04739-HMG-I and HMG-Y, DNA-binding domain containingprotein3e+0At5g09740HAM2 (histone acetyltransferase of the MYST family 2)C.G.S.X.
0.041e-344Triticum aestivumTaAffx.48971.1.S1_atCA610836--2e+1At5g63130octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.382e-70264Vitis vinifera1606728_atCF209779hypothetical protein LOC100262168-5e-1At3g57930unknown proteinC.G.S.X.
0.032e+032Zea maysZm.7515.1.A1_atBM078765hypothetical protein LOC100275963-5e+0At4g35750Rho-GTPase-activating protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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