Gene omics information

Query gene ID PtpAffx.24127.2.A1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.24127.2.A1_a_atCV274197hypothetical protein-6e-6At3g51000epoxide hydrolase, putativeS.X.H.G.
0.7393.6PtpAffx.24127.1.S1_atCV256258hypothetical protein-6e-4At3g51000epoxide hydrolase, putativeS.X.H.G.
0.6791.1PtpAffx.158416.1.S1_atCV131381hypothetical protein-9e-24At5g63620oxidoreductase, zinc-binding dehydrogenase family proteinS.X.H.G.
0.3255.2PtpAffx.201765.1.S1_atpmrna3523NAC domain protein, IPR003441-2e-11At1g34190anac017 (Arabidopsis NAC domain containing protein 17)S.X.H.G.
0.3153.7PtpAffx.18489.1.A1_s_atCV245016hypothetical protein-5e-3At1g49050aspartyl protease family proteinS.X.H.G.
0.1321.6PtpAffx.22348.1.S1_atAI165753--1e-22At5g48380leucine-rich repeat family protein / protein kinase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.398.2GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.495.9GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
3.894.9GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
3.293.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.410634PtpAffx.24127.1.S1_atCV256258hypothetical protein-6e-4At3g51000epoxide hydrolase, putativeC.G.S.X.
0.073e-859Ptp.7940.1.S1_atDN492838hypothetical protein-1e-10At5g66380ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)C.G.S.X.
0.071e-448PtpAffx.113927.1.A1_atCV278479--1e+0At2g23096oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.043e-240PtpAffx.210881.1.S1_atpmrna21363hypothetical protein-8e-3At3g05600epoxide hydrolase, putativeC.G.S.X.
0.022e+034PtpAffx.32992.1.S1_atCK091879hypothetical protein-6e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.022e+034PtpAffx.224873.1.S1_atpmrna43768--2e-6At5g51830pfkB-type carbohydrate kinase family proteinC.G.S.X.
0.022e+034PtpAffx.200840.1.S1_atpmrna1635hypothetical protein-1e-2At3g63470scpl40 (serine carboxypeptidase-like 40)C.G.S.X.
0.022e+034PtpAffx.147982.1.S1_s_atBI136334hypothetical protein-2e-115At5g26751ATSK11C.G.S.X.
0.022e+034PtpAffx.13414.1.S1_atCK107432hypothetical protein-2e-11At1g05205unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.126e-652Arabidopsis thalianaAt3g51000824264epoxide hydrolase, putativeF:epoxide hydrolase activity, catalytic activity;P:unknown;C:unknown;BOMFPAV---C.G.S.X.
0.211e-23111Glycine maxGmaAffx.67470.3.S1_atBM085427--2e-1At3g51000epoxide hydrolase, putativeC.G.S.X.
0.032e-136Hordeum vulgareContig19834_atContig19834--2e-1At5g17820peroxidase 57 (PER57) (P57) (PRXR10)C.G.S.X.
0.031e+132Oryza sativaOsAffx.18880.1.S1_at---0C.G.S.X.
0.036e+032Triticum aestivumTaAffx.56277.1.S1_atCA654883--1e+0At3g12130KH domain-containing protein / zinc finger (CCCH type) family proteinC.G.S.X.
0.037e-340Vitis vinifera1606931_atCD797978hypothetical protein LOC100266572-3e-4At1g56230unknown proteinC.G.S.X.
0.033e+032Zea maysZm.10377.1.A1_atBU050860hypothetical protein LOC100273283-1e+1At5g36960unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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