Gene omics information

Query gene ID PtpAffx.23797.2.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.23797.2.S1_atCV248730hypothetical protein-7e-16At4g20870FAH2 (FATTY ACID HYDROXYLASE 2)S.X.H.G.
0.5582.2PtpAffx.137964.1.S1_s_atCK103162hypothetical protein-9e-23At3g05910pectinacetylesterase, putativeS.X.H.G.
0.5078.6PtpAffx.55455.1.S1_a_atCV242141beta-ketoacyl-coa synthase family protein /// beta-ketoacyl-coa synthase family protein-4e-12At1g04220KCS2 (3-KETOACYL-COA SYNTHASE 2)S.X.H.G.
0.4067.0Ptp.574.1.A1_atCK088966hypothetical protein-1e+0At4g33670L-galactose dehydrogenase (L-GalDH)S.X.H.G.
0.2747.1Ptp.5292.1.S1_s_atCV249488hypothetical protein-5e-1At1g55330AGP21S.X.H.G.
0.2340.5PtpAffx.5661.1.A1_x_atCX657739hypothetical protein-3e-22At1g64650-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.297.6GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.997.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.696.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.696.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.596.1GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.494.0GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.293.5GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6901003PtpAffx.23797.1.S1_atCV263768hypothetical protein-3e-12At4g20870FAH2 (FATTY ACID HYDROXYLASE 2)C.G.S.X.
0.6901003PtpAffx.23797.1.S1_a_atCV263768hypothetical protein-3e-12At4g20870FAH2 (FATTY ACID HYDROXYLASE 2)C.G.S.X.
0.028e-136PtpAffx.74515.1.A1_atCX659834hypothetical protein-2e-21At5g05310unknown proteinC.G.S.X.
0.023e+034PtpAffx.222113.1.S1_atpmrna39337hypothetical protein-0Atcg00190-C.G.S.X.
0.013e+034PtpAffx.215757.1.S1_s_atpmrna30137ABC transporter family protein /// ABC transporter family protein /// ABC transporter family protein-1e-27At5g39040ATTAP2C.G.S.X.
0.013e+034PtpAffx.214900.1.S1_atpmrna28817hypothetical protein-0Atcg01280-C.G.S.X.
0.023e+034PtpAffx.213425.1.S1_atpmrna26251hypothetical protein-4e-1At5g12240unknown proteinC.G.S.X.
0.023e+034PtpAffx.204247.1.S1_s_atpmrna8349hypothetical protein-9e-5At4g22420-C.G.S.X.
0.013e+034Ptp.5639.1.S1_atCV257667hypothetical protein-3e-9At5g38895zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.397e-1685Arabidopsis thalianaAt4g20870827835FAH2 (FATTY ACID HYDROXYLASE 2)encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.---C.G.S.X.
0.294e-1583Glycine maxGma.9978.2.S1_a_atAI495867--6e-12At2g34770FAH1 (FATTY ACID HYDROXYLASE 1)C.G.S.X.
0.111e-654Hordeum vulgareContig6315_s_atContig6315--3e-9At2g34770FAH1 (FATTY ACID HYDROXYLASE 1)C.G.S.X.
0.203e-1687Oryza sativaOs03g0780800AK103085.1-Fatty acid hydroxylase domain containing protein4e-8At2g34770FAH1 (FATTY ACID HYDROXYLASE 1)C.G.S.X.
0.183e-1273Triticum aestivumTaAffx.14219.1.S1_atBJ319786--2e-4At4g20870FAH2 (FATTY ACID HYDROXYLASE 2)C.G.S.X.
0.036e-134Vitis vinifera1616478_atCA812094--2e+1At4g21960PRXR1C.G.S.X.
0.252e-1789Zea maysZm.13691.1.S1_atCD441073inositolphosphorylceramide-B C-26 hydroxylase-7e-13At2g34770FAH1 (FATTY ACID HYDROXYLASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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