Gene omics information

Query gene ID PtpAffx.23528.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.23528.1.S1_atCV228036hypothetical protein-6e-106At5g05200ABC1 family proteinS.X.H.G.
0.7393.6Ptp.4058.1.A1_s_atDN484986--5e-7At1g21680-S.X.H.G.
0.4471.9Ptp.2593.1.S1_s_atCK093742hypothetical protein-1e-7At5g60750CAAX amino terminal protease family proteinS.X.H.G.
0.4067.0Ptp.2850.1.S1_atDN493728hypothetical protein-2e-46At1g11720ATSS3 (starch synthase 3)S.X.H.G.
0.4067.0Ptp.2208.1.S1_s_atCK089346hypothetical protein-9e-11At3g47060ftsh7 (FtsH protease 7)S.X.H.G.
0.3052.0PtpAffx.139342.1.S1_atCN520206hypothetical protein-4e-1At3g32090transcription factor-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.698.3GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.297.6GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.796.3GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.596.1GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.494.0GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.691.3GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.352e-159563PtpAffx.221646.1.S1_atpmrna38630hypothetical protein-5e-33At5g05200ABC1 family proteinC.G.S.X.
0.161e-61238PtpAffx.139538.1.S1_atDN499819--1e-38At5g05200ABC1 family proteinC.G.S.X.
0.016e-240PtpAffx.201096.1.S1_atpmrna2165hypothetical protein-2e-4At1g08300-C.G.S.X.
0.026e-240PtpAffx.123170.1.S1_atCV236141hypothetical protein-8e-31At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)C.G.S.X.
0.019e-136PtpAffx.213286.1.S1_atpmrna25980hypothetical protein-7e-2At2g18840integral membrane Yip1 family proteinC.G.S.X.
0.029e-136PtpAffx.127926.1.A1_atCV239445hypothetical protein-2e-2At3g52490heat shock protein-relatedC.G.S.X.
0.023e+034PtpAffx.69444.1.A1_atCV257148--8e-2At5g13910LEP (LEAFY PETIOLE)C.G.S.X.
0.023e+034PtpAffx.5015.1.A1_atCF228047actin related protein-1e-4At5g56180ATARP8 (ACTIN-RELATED PROTEIN 8)C.G.S.X.
0.013e+034PtpAffx.220031.1.S1_atpmrna36286hypothetical protein-6e-27At4g18030dehydration-responsive family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.446e-106385Arabidopsis thalianaAt5g05200830402ABC1 family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast, plastoglobule;OBMPFAV---C.G.S.X.
0.578e-109395Glycine maxGma.18030.1.S1_atCD396158--2e-49At5g05200ABC1 family proteinC.G.S.X.
0.201e-31137Hordeum vulgareContig7015_atContig7015--1e-21At5g05200ABC1 family proteinC.G.S.X.
0.282e-21105Oryza sativaOs07g0227800CB620518-ABC-1 domain containing protein4e-18At5g05200ABC1 family proteinC.G.S.X.
0.221e-33145Triticum aestivumTa.11748.2.A1_a_atBJ219102--4e-3At5g05200ABC1 family proteinC.G.S.X.
0.117e-32137Vitis vinifera1620310_atCA814688hypothetical protein LOC100243380-4e-29At5g05200ABC1 family proteinC.G.S.X.
0.024e+032Zea maysZm.4371.1.A1_atBG517913hypothetical protein LOC100217272-3e-1At5g22240OFP10C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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