Gene omics information

Query gene ID PtpAffx.22865.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.22865.1.S1_atDN484594hypothetical protein-3e-5At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinS.X.H.G.
0.5582.2PtpAffx.114007.1.A1_s_atCV274878hypothetical protein-2e+0At5g02090unknown proteinS.X.H.G.
0.5078.6PtpAffx.211137.1.S1_atpmrna21879hypothetical protein-5e-8At3g03540NPC5 (NON-SPECIFIC PHOSPHOLIPASE C5)S.X.H.G.
0.4471.9Ptp.4515.1.S1_s_atCV253179hypothetical protein-5e-79At5g47770FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1)S.X.H.G.
0.4471.9Ptp.4933.1.S1_atDN490851hypothetical protein-9e-19At3g11920glutaredoxin-relatedS.X.H.G.
0.3153.7PtpAffx.216800.1.S1_atpmrna31819hypothetical protein-1e-1At3g54070ankyrin repeat family proteinS.X.H.G.
0.3153.7PtpAffx.5423.1.S1_s_atCV229504hypothetical protein-3e-24At4g11820MVA1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.899.4GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
7.698.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.296.8GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.996.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.067e-1375PtpAffx.221864.1.S1_atpmrna38957hypothetical protein-1e+0At2g33110ATVAMP723 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 723)C.G.S.X.
0.036e-446PtpAffx.203780.1.S1_atpmrna7465hypothetical protein-1e-4At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinC.G.S.X.
0.031e-138PtpAffx.209698.1.S1_atpmrna19141hypothetical protein-1e-1At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinC.G.S.X.
0.026e-136PtpAffx.30617.1.S1_a_atDN486396hypothetical protein-1e-35At1g18400BEE1 (BR Enhanced Expression 1)C.G.S.X.
0.036e-136Ptp.7783.1.S1_atDN499174--4e+0At3g57910D111/G-patch domain-containing proteinC.G.S.X.
0.022e+034PtpAffx.9718.1.S1_atBU886551hypothetical protein-2e+0At2g19980allergen V5/Tpx-1-related family proteinC.G.S.X.
0.022e+034PtpAffx.213726.1.S1_atpmrna26788hypothetical protein-4e-1At1g10200WLIM1C.G.S.X.
0.012e+034PtpAffx.213308.1.S1_atpmrna26030hypothetical protein-1e-2At1g79640ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.012e+034PtpAffx.209963.1.S1_atpmrna19650hypothetical protein-3e-10At1g28280VQ motif-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-550Arabidopsis thalianaAt3g09020820054alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinF:transferase activity, transferring glycosyl groups, transferase activity;P:biological_process unknown;C:Golgi stack;MPOB---C.G.S.X.
0.032e+034Glycine maxGmaAffx.76797.1.S1_atBF325422--1e+0At5g66110metal ion bindingC.G.S.X.
0.038e-134Hordeum vulgareContig25988_atContig25988--3e+0At3g11930universal stress protein (USP) family proteinC.G.S.X.
0.023e+034Oryza sativaOs10g0430100NM_196619.1--4e-2At3g22070proline-rich family proteinC.G.S.X.
0.037e+032Triticum aestivumTaAffx.32462.1.S1_atCA594668--3e+0At4g16220hydrolase, acting on ester bondsC.G.S.X.
0.022e+032Vitis vinifera1622073_atCF404214--4e+0At5g02780In2-1 protein, putativeC.G.S.X.
0.021e+130Zea maysZmAffx.800.1.A1_atAI770361--2e-4At3g58580hydrolaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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