Gene omics information

Query gene ID PtpAffx.22809.2.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.22809.2.S1_a_atCF228627hypothetical protein-5e-6At4g30460glycine-rich proteinS.X.H.G.
0.4369.7PtpAffx.12342.1.A1_atCK097643hypothetical protein-4e-6At5g04080unknown proteinS.X.H.G.
0.4067.0Ptp.5500.1.S1_atDN492580hypothetical protein-1e-26At5g19530ACL5 (ACAULIS 5)S.X.H.G.
0.3559.7PtpAffx.12342.1.A1_x_atCK097643hypothetical protein-4e-6At5g04080unknown proteinS.X.H.G.
0.2950.5PtpAffx.58991.1.S1_atBP933795--3e-1At5g66660unknown proteinS.X.H.G.
0.2340.5PtpAffx.63173.1.A1_atCV251405--5e-7At2g46780RNA binding / nucleic acid binding / nucleotide bindingS.X.H.G.
0.1016.3PtpAffx.202874.1.S1_atpmrna5680white-brown-complex ABC transporter family-2e-63At1g31770ABC transporter family proteinS.X.H.G.
0.0914.6PtpAffx.203250.1.S1_atpmrna64352-oxoglutarate-dependent dioxygenase-1e-7At4g23340oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.0711.6PtpAffx.210013.1.S1_atpmrna19743hypothetical protein-4e-36At3g20640ethylene-responsive protein -relatedS.X.H.G.
0.069.8PtpAffx.12708.1.A1_atCV256109hypothetical protein-8e-44At2g47260WRKY23S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.699.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
6.898.0GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
6.597.8GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
6.597.8GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
5.396.9GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
5.296.8GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.995.1GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.894.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.382e-49196PtpAffx.90112.1.S1_atCV236980--1e-7At4g30460glycine-rich proteinC.G.S.X.
0.382e-49196PtpAffx.90112.1.S1_s_atCV236980hypothetical protein-1e-7At4g30460glycine-rich proteinC.G.S.X.
0.442e-43176Ptp.3580.1.S1_s_atDN492558hypothetical protein-1e-7At4g30460glycine-rich proteinC.G.S.X.
0.031e-138PtpAffx.63940.1.S1_s_atCV273881hypothetical protein-2e+0At4g30450glycine-rich proteinC.G.S.X.
0.021e-138PtpAffx.35159.1.S1_atCV272495--4e-5At3g59500integral membrane HRF1 family proteinC.G.S.X.
0.031e-138PtpAffx.29200.1.S1_atDN484807hypothetical protein-9e-11At1g50300TAF15 (TBP-associated factor 15)C.G.S.X.
0.031e-138PtpAffx.29200.1.S1_s_atDN484807hypothetical protein-9e-11At1g50300TAF15 (TBP-associated factor 15)C.G.S.X.
0.021e-138PtpAffx.207848.1.S1_atpmrna15582hypothetical protein-1e-39At1g50300TAF15 (TBP-associated factor 15)C.G.S.X.
0.031e-138PtpAffx.121282.1.A1_atCV245703hypothetical protein-4e-1At3g28620zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.075e-652Arabidopsis thalianaAt4g30460829169glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA---C.G.S.X.
0.067e-342Glycine maxGma.13580.3.S1_atBI973761--5e-5At5g19430zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+032Hordeum vulgareHVSMEn0012H13r2_atHVSMEn0012H13r2--5e-2At5g63280zinc finger (C2H2 type) family proteinC.G.S.X.
0.046e-136Oryza sativaOs08g0346400AK059644.1-Phosphate starvation regulator protein (Regulatoryprotein of P- starvation acclimation response Psr1)3e-21At4g13640UNE16 (unfertilized embryo sac 16)C.G.S.X.
0.035e+032Triticum aestivumTaAffx.50683.1.S1_atCA736961--3e+0At5g06300carboxy-lyaseC.G.S.X.
0.049e-236Vitis vinifera1618298_atCB347158hypothetical protein LOC100242042-9e-11At1g09645unknown proteinC.G.S.X.
0.048e+030Zea maysZmAffx.335.1.A1_atAI670522--7e-2At3g13130unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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