Gene omics information

Query gene ID PtpAffx.225610.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.225610.1.S1_atpmrna45070hypothetical protein-9e-4At5g01050laccase family protein / diphenol oxidase family proteinS.X.H.G.
0.6086.0PtpAffx.211797.1.S1_s_atpmrna23135hypothetical protein-1e-23At3g21530endonuclease/exonuclease/phosphatase family proteinS.X.H.G.
0.5078.6PtpAffx.795.1.A1_atCV273354hypothetical protein-5e+0At5g59480haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.4471.9PtpAffx.204632.1.S1_atpmrna9105hypothetical protein-1e-1At5g50200WR3 (WOUND-RESPONSIVE 3)S.X.H.G.
0.4471.9Ptp.7695.1.S1_s_atBU862504hypothetical protein-2e-2At5g02020unknown proteinS.X.H.G.
0.3661.6PtpAffx.225008.1.S1_atpmrna43994hypothetical protein-2e+0At5g65580unknown proteinS.X.H.G.
0.2340.5PtpAffx.214531.1.S1_atpmrna28244hypothetical protein-1e-7At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.099.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
9.898.9GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
7.298.1GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
6.797.9GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
6.297.6GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9702934PtpAffx.225032.1.S1_s_atpmrna44061hypothetical protein-6e-5At5g01050laccase family protein / diphenol oxidase family proteinC.G.S.X.
0.9702934PtpAffx.225032.1.S1_atpmrna44061hypothetical protein-6e-5At5g01050laccase family protein / diphenol oxidase family proteinC.G.S.X.
0.193e-29131Ptp.2974.1.S1_atBU885840laccase 110a-3e+0At5g63634unknown proteinC.G.S.X.
0.035e-654PtpAffx.26902.1.S1_atCV231858laccase 110b-1e-21At5g60020LAC17 (laccase 17)C.G.S.X.
0.031e-346Ptp.1846.1.S1_s_atCK093471hypothetical protein-2e-17At5g60020LAC17 (laccase 17)C.G.S.X.
0.031e-346Ptp.1846.1.S1_atCK093471hypothetical protein-2e-17At5g60020LAC17 (laccase 17)C.G.S.X.
0.018e-240PtpAffx.63808.1.A1_atCV226852hypothetical protein-7e-31At5g60020LAC17 (laccase 17)C.G.S.X.
0.018e-240PtpAffx.224987.1.S1_atpmrna43950hypothetical protein-5e-11At1g18140LAC1 (Laccase 1)C.G.S.X.
0.018e-240PtpAffx.224162.1.S1_atpmrna42438hypothetical protein-9e-4At5g09360LAC14 (laccase 14)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.119e-446Arabidopsis thalianaAt5g01050831812laccase family protein / diphenol oxidase family proteinputative laccase, a member of laccase family of genes (17 members in Arabidopsis).---C.G.S.X.
0.105e-344Glycine maxGmaAffx.60533.1.S1_atBQ453624--3e+0At3g27090-C.G.S.X.
0.031e-138Hordeum vulgareHS05I21u_atHS05I21u--4e+0At3g01322-C.G.S.X.
0.037e-344Oryza sativaOs12g0258700BI813311-Multicopper oxidase, type 1 domain containingprotein1e-3At5g05390LAC12 (laccase 12)C.G.S.X.
0.036e-240Triticum aestivumTa.6939.2.S1_atBJ312772--7e+0At4g30510AtATG18bC.G.S.X.
0.046e-238Vitis vinifera1611641_atCB974655hypothetical protein LOC100258642-7e-2At5g07130LAC13 (laccase 13)C.G.S.X.
0.032e+034Zea maysZm.5757.1.A1_atAI637260laccase 1-5e-4At5g01040LAC8 (laccase 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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